RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 CCDC78A2IDD5 438 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SMIM23A6NLE4 172 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PRRT4C9JH25 899 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 H0Y626 953 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 CCL22O00626 93 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TRAFD1O14545 582 aaPredicted RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 AURKAO14965 403 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 LDB2O43679 373 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PABPC1P11940 636 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 SRCP12931 536 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TSHRP16473 764 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SP100P23497 879 aaPredicted RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 PSMA3P25788 255 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 GABRB3P28472 473 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SERPINH1P50454 418 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 CSRP3P50461 194 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 RENBPP51606 427 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PGGT1BP53609 377 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 GEMP55040 296 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 FCHO2Q0JRZ9 810 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 GRM2Q14416 872 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SLC1A5Q15758 541 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SLC14A2Q15849 920 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PCSK7Q16549 785 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 CDKN3Q16667 212 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ANO4Q32M45 955 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 KRT71Q3SY84 523 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ANKRD20A4Q4UJ75 823 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 AGBL2Q5U5Z8 902 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 IL31Q6EBC2 164 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ITPRIPL1Q6GPH6 555 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ESRP1Q6NXG1 681 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 C3orf62Q6ZUJ4 267 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 KDELC2Q7Z4H8 507 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 EXOC3L1Q86VI1 746 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TDRPQ86YL5 185 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 MFSD6LQ8IWD5 586 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PDIK1LQ8N165 341 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 KRT222Q8N1A0 295 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TTC30BQ8N4P2 665 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SLC25A41Q8N5S1 370 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 CELF5Q8N6W0 485 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 NAT16Q8N8M0 369 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ATP11CQ8NB49 1132 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 OR13J1Q8NGT2 312 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 OR6K2Q8NGY2 324 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PYROXD1Q8WU10 500 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SLC44A1Q8WWI5 657 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TTC17Q96AE7 1141 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 LRRC39Q96DD0 335 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 STAMBPL1Q96FJ0 436 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 RPL10LQ96L21 214 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 ATP6V1G3Q96LB4 118 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 NUDCD1Q96RS6 583 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 DDX50Q9BQ39 737 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 KXD1Q9BQD3 176 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 KIFC1Q9BW19 673 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 BBS2Q9BXC9 721 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 MUC3BQ9H195 1237 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TNKS2Q9H2K2 1166 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 EBF3Q9H4W6 596 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 LRRC40Q9H9A6 602 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 KIF9Q9HAQ2 790 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PIDD1Q9HB75 910 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 FBRSL1Q9HCM7 1045 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 XAB2Q9HCS7 855 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 CHRAC1Q9NRG0 131 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 VPS45Q9NRW7 570 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TREX1Q9NSU2 369 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 DUS2Q9NX74 493 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 GDE1Q9NZC3 331 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 LMCD1Q9NZU5 365 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 MAP10Q9P2G4 905 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ZC3H7BQ9UGR2 993 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 SLCO3A1Q9UIG8 710 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 GGA2Q9UJY4 613 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 SOX13Q9UN79 622 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 CHKBQ9Y259 395 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 TCF20Q9UGU0 1960 aaKnown RBP6.33□□□□□ -1.4
MDM2-225ENST00000539479 SCN8AQ9UQD0 1980 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 ANKRD36A6QL64 1941 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 MIA3Q5JRA6 1907 aa6.33□□□□□ -1.4
MDM2-225ENST00000539479 EYSQ5T1H1 3165 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 UNC80Q8N2C7 3258 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 A0A087WUV0 522 aaPredicted RBP6.32□□□□□ -1.4
MDM2-225ENST00000539479 FAM237BA0A1B0GVD1 139 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 A0A1W2PPM1 405 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 MROH6A6NGR9 719 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 SDR42E2A6NKP2 422 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 ERI2A8K979 691 aaKnown RBP6.32□□□□□ -1.4
MDM2-225ENST00000539479 E7EVH7 732 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 ANHXE9PGG2 379 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 GAPDHSO14556 408 aaPredicted RBP6.32□□□□□ -1.4
MDM2-225ENST00000539479 RASGRF2O14827 1237 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 SPINT1O43278 529 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 HTRA2O43464 458 aaPredicted RBP6.32□□□□□ -1.4
MDM2-225ENST00000539479 ATP9BO43861 1147 aa6.32□□□□□ -1.4
MDM2-225ENST00000539479 TULP3O75386 442 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms