RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 ORAI3Q9BRQ5 295 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 BTBD1Q9H0C5 482 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 PCED1AQ9H1Q7 454 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 EPC1Q9H2F5 836 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 ATP13A3Q9H7F0 1226 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 SGK2Q9HBY8 427 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 SCUBE2Q9NQ36 999 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 HOMER3Q9NSC5 361 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 SEPT10Q9P0V9 454 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 NCKAP1Q9Y2A7 1128 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 RAI2Q9Y5P3 530 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 FADS3Q9Y5Q0 445 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 R4GN57 208 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 ZNF292O60281 2723 aa9.02□□□□□ -0.97
NPIPB4-211ENST00000539318 LOC285095A0A1B0GVY8 99 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 A0A1W2PQ67 120 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 METTL12A8MUP2 240 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 LATO43561 262 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ZNF189O75820 626 aaPredicted RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 PGLSO95336 258 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 MT-CYBP00156 380 aaPredicted RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 EPOP01588 193 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 TUBB4AP04350 444 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 IGHV4-34P06331 123 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 SERPINF2P08697 491 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 NFKB1P19838 968 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 SERPINA4P29622 427 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 CASQ1P31415 396 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 CD86P42081 329 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ABL2P42684 1182 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 KCNJ1P48048 391 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 NEK3P51956 506 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ADPRHP54922 357 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ITKQ08881 620 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 CCDC15Q0P6D6 951 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 SNX1Q13596 522 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 TMEM52BQ4KMG9 183 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 PMS2CLQ68D20 193 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 NEK5Q6P3R8 708 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 TTC27Q6P3X3 843 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 KDELC1Q6UW63 502 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 TTC7BQ86TV6 843 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 FAM124AQ86V42 546 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 C11orf74Q86VG3 221 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 SLC41A1Q8IVJ1 513 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 GLIS1Q8NBF1 620 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 OR2T34Q8NGX1 318 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ATL2Q8NHH9 583 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 SPATA22Q8NHS9 363 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 CCDC110Q8TBZ0 833 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 DNASE2BQ8WZ79 361 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ATOH1Q92858 354 aaPredicted RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 PPP1R16AQ96I34 528 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 RBM15Q96T37 977 aaKnown RBP eCLIP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 NAP1L3Q99457 506 aaPredicted RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 GPR174Q9BXC1 333 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 AP1M1Q9BXS5 423 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 TDRD1Q9BXT4 1180 aaKnown RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 SEMA4AQ9H3S1 761 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 C6orf106Q9H6K1 298 aaPredicted RBP9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 EBF2Q9HAK2 575 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 RNF14Q9UBS8 474 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 ZNF148Q9UQR1 794 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 NEU2Q9Y3R4 380 aa9.01□□□□□ -0.97
NPIPB4-211ENST00000539318 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 UPK3BL1B0FP48 263 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 ANKRD66B4E2M5 251 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 UPK3BL2E5RIL1 263 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 TSPAN6O43657 245 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 OPHN1O60890 802 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 METTL18O95568 372 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 SEMA4FO95754 770 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 ETS1P14921 441 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 ADRA1AP35348 466 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 COILP38432 576 aaPredicted RBP9□□□□□ -0.97
NPIPB4-211ENST00000539318 PTGER3P43115 390 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 CCR5P51681 352 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 RPL26P61254 145 aaKnown RBP9□□□□□ -0.97
NPIPB4-211ENST00000539318 POLR2LP62875 67 aaKnown RBP9□□□□□ -0.97
NPIPB4-211ENST00000539318 MSLNQ13421 630 aaPredicted RBP9□□□□□ -0.97
NPIPB4-211ENST00000539318 SIM2Q14190 667 aaPredicted RBP9□□□□□ -0.97
NPIPB4-211ENST00000539318 PTPRRQ15256 657 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 CDKN3Q16667 212 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 PARP6Q2NL67 630 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 P3H1Q32P28 736 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 TMEM259Q4ZIN3 620 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 KCTD11Q693B1 232 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 FBXL19Q6PCT2 694 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 ZC3H14Q6PJT7 736 aaKnown RBP9□□□□□ -0.97
NPIPB4-211ENST00000539318 RANBP10Q6VN20 620 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 PRUNE1Q86TP1 453 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 ZSCAN30Q86W11 494 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 TMEFF1Q8IYR6 380 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9□□□□□ -0.97
NPIPB4-211ENST00000539318 OR14C36Q8NHC7 312 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 GANCQ8TET4 914 aa9□□□□□ -0.97
NPIPB4-211ENST00000539318 MAGOHBQ96A72 148 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms