RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 SDE2Q6IQ49 451 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 USP17L1Q7RTZ2 530 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 LIX1LQ8IVB5 337 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 MAPKAPK5Q8IW41 473 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 KIAA1958Q8N8K9 716 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 GTF2H4Q92759 462 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 NXNL1Q96CM4 212 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 MCRS1Q96EZ8 462 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 RNF170Q96K19 258 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 ZNF578Q96N58 590 aaPredicted RBP12.52□□□□□ -0.41
USP3-203ENST00000538686 MCMBPQ9BTE3 642 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 EPS8L2Q9H6S3 715 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 TUFT1Q9NNX1 390 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 IARS2Q9NSE4 1012 aaKnown RBP12.52□□□□□ -0.41
USP3-203ENST00000538686 KLHL11Q9NVR0 708 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 IL37Q9NZH6 218 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 EIF3KQ9UBQ5 218 aaKnown RBP12.52□□□□□ -0.41
USP3-203ENST00000538686 SLCO3A1Q9UIG8 710 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 MTMR7Q9Y216 660 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 RAP2CQ9Y3L5 183 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
USP3-203ENST00000538686 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 A0A0X1KG70 313 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 ZNF99A8MXY4 864 aaPredicted RBP12.51□□□□□ -0.41
USP3-203ENST00000538686 CHRNA1P02708 482 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 GPIP06744 558 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 SPNP16150 400 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 ERP29P30040 261 aaKnown RBP12.51□□□□□ -0.41
USP3-203ENST00000538686 CACNB3P54284 484 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 RHAGQ02094 409 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 SPIRE1Q08AE8 756 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 INCA1Q0VD86 236 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 BAMBIQ13145 260 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 FAM45BPQ6NSW5 357 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 LETMD1Q6P1Q0 360 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 THAP5Q7Z6K1 395 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
USP3-203ENST00000538686 SAMD14Q8IZD0 417 aaPredicted RBP12.51□□□□□ -0.41
USP3-203ENST00000538686 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 FAM45AQ8TCE6 357 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 MAPK15Q8TD08 544 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 BLOC1S5Q8TDH9 187 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 NPAS2Q99743 824 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 APOL4Q9BPW4 351 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 RSPH9Q9H1X1 276 aaPredicted RBP12.51□□□□□ -0.41
USP3-203ENST00000538686 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 TMEM216Q9P0N5 145 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 OAZ3Q9UMX2 235 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 COQ4Q9Y3A0 265 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 PCDHGB3Q9Y5G1 929 aa12.51□□□□□ -0.41
USP3-203ENST00000538686 AGAP5A6NIR3 686 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 H0Y626 953 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 H3BUI4 141 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 MEIS1O00470 390 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 EI24O14681 340 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ANGPT2O15123 496 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
USP3-203ENST00000538686 MAP3K6O95382 1288 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 CLIC3O95833 236 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 KRT19P08727 400 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ICAM2P13598 275 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ARRB2P32121 409 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 UGT2B10P36537 528 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 NPTX2P47972 431 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 GTF2IP78347 998 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 AP3B2Q13367 1082 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 CYP2R1Q6VVX0 501 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 PAGE2Q7Z2X7 111 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 THNSL1Q8IYQ7 743 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 METTL4Q8N3J2 472 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 DTX3Q8N9I9 347 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ANKRD49Q8WVL7 239 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 CPA5Q8WXQ8 436 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 SNAPC3Q92966 411 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 UBXN10Q96LJ8 280 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 VPS33BQ9H267 617 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 GLTPQ9NZD2 209 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 NAALAD2Q9Y3Q0 740 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 KCNE2Q9Y6J6 123 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 KCPQ6ZWJ8 1503 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 TNRC6CQ9HCJ0 1690 aaKnown RBP12.5□□□□□ -0.41
USP3-203ENST00000538686 PRORSD1PA6NEY8 169 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 PAHP00439 452 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 PDGFAP04085 211 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 ADORA2AP29274 412 aa12.5□□□□□ -0.41
USP3-203ENST00000538686 KRT20P35900 424 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms