RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NETO2Q8NC67 525 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 TMEM74Q96NL1 305 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 EDEM3Q9BZQ6 932 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 RAB6CQ9H0N0 254 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 LRRN3Q9H3W5 708 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 SIX2Q9NPC8 291 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 SEPT10Q9P0V9 454 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 OR12D3Q9UGF7 316 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 ACSL6Q9UKU0 697 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 HPCAL4Q9UM19 191 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
SMARCA4-206ENST00000538456 NVLO15381 856 aaKnown RBP14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 SUV39H1O43463 412 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 RASGRP1O95267 797 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 CCKBRP32239 447 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 SCNN1AP37088 669 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 GABRB2P47870 512 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 LRRC14Q15048 493 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 CDO1Q16878 200 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 LVRNQ6Q4G3 990 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 ENPP7Q6UWV6 458 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 GKN2Q86XP6 184 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 ELOA2Q8IYF1 753 aaPredicted RBP14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 EMC1Q8N766 993 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 PDXPQ96GD0 296 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 GDAP1L1Q96MZ0 367 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 FOXJ2Q9P0K8 574 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 OR1A2Q9Y585 309 aa14.16□□□□□ -0.14
SMARCA4-206ENST00000538456 GTPBP10A4D1E9 387 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 FAM72CH0Y354 149 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 TOR1BO14657 336 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 BUB1O43683 1085 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 RAMP2O60895 175 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 TMCC1O94876 653 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 WT1P19544 449 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 XPAP23025 273 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 HTR1BP28222 390 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 CDH5P33151 784 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 ETV5P41161 510 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 MAPKAPK2P49137 400 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 MAPK10P53779 464 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 SRP54P61011 504 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 SRSF1Q07955 248 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 RAPGEF1Q13905 1077 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 NFATC4Q14934 902 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 TBR1Q16650 682 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 WSCD2Q2TBF2 565 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 COLEC12Q5KU26 742 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 FAM72AQ5TYM5 149 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 KCTD16Q68DU8 428 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 FAM72DQ6L9T8 149 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 XKR5Q6UX68 686 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 BNIPLQ7Z465 357 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 NLRP14Q86W24 1093 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 FAM72BQ86X60 149 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 SFTPA2Q8IWL1 248 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 FAM71AQ8IYT1 594 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 ZSCAN1Q8NBB4 408 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 MAGEB5Q9BZ81 275 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 METTL5Q9NRN9 209 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 TMEM51Q9NW97 253 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 KLQ9UEF7 1012 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 TMEM59LQ9UK28 342 aa14.15□□□□□ -0.14
SMARCA4-206ENST00000538456 CXorf51AA0A1B0GTR3 108 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 PIGNO95427 931 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 IGSF6O95976 241 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 PCCBP05166 539 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 CYP11B1P15538 503 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 TIMP2P16035 220 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 RHOQP17081 205 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 MTIF2P46199 727 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 PEX5P50542 639 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 BPIFB4P59827 614 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 RHOAP61586 193 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 RAD51Q06609 339 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 INPP5AQ14642 412 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 C15orf59Q2T9L4 293 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 PHF19Q5T6S3 580 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 MANEALQ5VSG8 457 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 HTR3CQ8WXA8 447 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 JPH3Q8WXH2 748 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 CPA5Q8WXQ8 436 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 USP7Q93009 1102 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 NCAPGQ9BPX3 1015 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 APOOQ9BUR5 198 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 TTYH3Q9C0H2 523 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 MAGEH1Q9H213 219 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 TMEM248Q9NWD8 314 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 RWDD2AQ9UIY3 292 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 NEU3Q9UQ49 428 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 PCDHB11Q9Y5F2 797 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 RNF215Q9Y6U7 377 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 SDK2Q58EX2 2172 aa14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 ARHGEF17Q96PE2 2063 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 ZFC3H1O60293 1989 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-206ENST00000538456 LRRK2Q5S007 2527 aa14.13□□□□□ -0.15
SMARCA4-206ENST00000538456 RELNP78509 3460 aa14.13□□□□□ -0.15
SMARCA4-206ENST00000538456 TMEM110-MUSTN1A8MSY1 372 aa14.13□□□□□ -0.15
SMARCA4-206ENST00000538456 B4DGG1 531 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms