RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZNF224Q9NZL3 707 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ST14Q9Y5Y6 855 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 KRT87PA6NCN2 255 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 HDAC3O15379 428 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 JRKO75564 520 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PRLP01236 227 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 STT3AP46977 705 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FMO1Q01740 532 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FSTL1Q12841 308 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NFATC3Q12968 1075 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MAMLD1Q13495 774 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RBM48Q5RL73 367 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NDUFAF5Q5TEU4 345 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 OGFOD2Q6N063 350 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PLEKHG7Q6ZR37 379 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CPSF7Q8N684 471 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 LINC00116Q8NCU8 138 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ROPN1LQ96C74 230 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CCDC126Q96EE4 140 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MMP19Q99542 508 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NUAK2Q9H093 628 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FAM124BQ9H5Z6 455 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 AP3M1Q9Y2T2 418 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHA10Q9Y5I2 948 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 KRBA1A5PL33 1030 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TP73O15350 636 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ERCC2P18074 760 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ENDOUP21128 410 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PPP3CAQ08209 521 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SQLEQ14534 574 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZSWIM7Q19AV6 140 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NAPEPLDQ6IQ20 393 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 LDHDQ86WU2 507 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SPPL2CQ8IUH8 684 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 EID3Q8N140 333 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CBR4Q8N4T8 237 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 GALNT6Q8NCL4 622 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SLC2A14Q8TDB8 520 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PTCD2Q8WV60 388 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FAM84AQ96KN4 292 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SYT17Q9BSW7 474 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SLA2Q9H6Q3 261 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 COQ10BQ9H8M1 238 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 UBP1Q9NZI7 540 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHGC3Q9UN70 934 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 IRS2Q9Y4H2 1338 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MARF1Q9Y4F3 1742 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RSL1D1O76021 490 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 IL32P24001 234 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RPS12P25398 132 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 L1CAMP32004 1257 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 POU4F1Q01851 419 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 KCNJ8Q15842 424 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SPESP1Q6UW49 350 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 KIAA0408Q6ZU52 694 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ZDHHC13Q8IUH4 622 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ARMC8Q8IUR7 673 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CAMKK1Q8N5S9 505 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RXFP2Q8WXD0 754 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RANBP9Q96S59 729 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ADI1Q9BV57 179 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 APOL5Q9BWW9 433 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TEX12Q9BXU0 123 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SPRTNQ9H040 489 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FAM49AQ9H0Q0 323 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 NECTIN3Q9NQS3 549 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 IL17RBQ9NRM6 502 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ANKRD6Q9Y2G4 727 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 M0QZ92 97 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 BNIP3LO60238 219 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 GABBR2O75899 941 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PCSK2P16519 638 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 GCAP28676 217 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 GRIA4P48058 902 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 LRRC74AQ0VAA2 488 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 E2F2Q14209 437 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PDK2Q15119 407 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PPM1LQ5SGD2 360 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SV2AQ7L0J3 742 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 KCNMB4Q86W47 210 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SPATA6LQ8N4H0 392 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 FIBCD1Q8N539 461 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SLC4A11Q8NBS3 891 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MCFD2Q8NI22 146 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 MZB1Q8WU39 189 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 DPF3Q92784 378 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CENPNQ96H22 339 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TSEN34Q9BSV6 310 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TEX13BQ9BXU2 312 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM45AQ9NWC5 275 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CPSF3Q9UKF6 684 aaKnown RBP5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHA11Q9Y5I1 949 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 PDPK1O15530 556 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CAPN15O75808 1086 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 ALX3O95076 343 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 SNX4O95219 450 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 INHBBP09529 407 aa5.43□□□□□ -1.54
PTPRD-213ENST00000537002 CYP2F1P24903 491 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms