RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 H0YJX3 145 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CTDSP2O14595 271 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLC9A3R1O14745 358 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 AKAP10O43572 662 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PDE8AO60658 829 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 AOC2O75106 756 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 DAB1O75553 588 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PSKH1P11801 424 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 POU2F1P14859 743 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 IL7RP16871 459 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 AOC1P19801 751 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PIK3R1P27986 724 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CD40LGP29965 261 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 HNF1BP35680 557 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 MASP1P48740 699 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SMCPP49901 116 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 TAS2R40P59535 323 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PSMC6P62333 389 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CAV1Q03135 178 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ZNF846Q147U1 533 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SNX17Q15036 470 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PFKFB3Q16875 520 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 IMPG1Q17R60 797 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ZFP69Q49AA0 526 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 NHSL2Q5HYW2 709 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 STEAP3Q658P3 488 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 FAM109BQ6ICB4 259 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 FAM122CQ6P4D5 195 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 KIAA1324Q6UXG2 1013 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 KIAA0408Q6ZU52 694 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLC47A2Q86VL8 602 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 AMIGO1Q86WK6 493 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CCDC60Q8IWA6 550 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 UNC45BQ8IWX7 931 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PALM2Q8IXS6 379 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 UNC5BQ8IZJ1 945 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 CRIPAKQ8N1N5 446 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ZCCHC9Q8N567 271 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 CMASQ8NFW8 434 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 OR4M2Q8NGB6 313 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 OR4M1Q8NGD0 313 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SNIP1Q8TAD8 396 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 TBCKQ8TEA7 893 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLC44A1Q8WWI5 657 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 RAD54LQ92698 747 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 DPF3Q92784 378 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLC35C1Q96A29 364 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 SIPA1Q96FS4 1042 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 NEDD4LQ96PU5 975 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ACO2Q99798 780 aaKnown RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 AGPAT1Q99943 283 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 C1orf50Q9BV19 199 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 GLIS2Q9BZE0 524 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 MS4A7Q9GZW8 240 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 C1orf21Q9H246 121 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 RMND5AQ9H871 391 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 RANGRFQ9HD47 186 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 CD209Q9NNX6 404 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 SLAMF7Q9NQ25 335 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 AKIP1Q9NQ31 210 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ARMC1Q9NVT9 282 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 C14orf119Q9NWQ9 140 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 EVLQ9UI08 416 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 ENPP5Q9UJA9 477 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ANAPC7Q9UJX3 599 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 ZNF221Q9UK13 617 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 PCOLCE2Q9UKZ9 415 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 MAGED2Q9UNF1 606 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 SNX7Q9UNH6 387 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 FRMPD2Q68DX3 1309 aaPredicted RBP3.76□□□□□ -1.81
MCF2-210ENST00000536274 KDM3AQ9Y4C1 1321 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 FOCADQ5VW36 1801 aa3.76□□□□□ -1.81
MCF2-210ENST00000536274 MYH9P35579 1960 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 TRIM64BA6NI03 449 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 F5H6K3 240 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PHGDHO43175 533 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 NOS1APO75052 506 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 INMTO95050 263 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 MAP3K6O95382 1288 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TGDSO95455 350 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 DNTTP04053 509 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SNRPAP09012 282 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 DHRS4L1P0CG22 281 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 JUNDP17535 347 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 KLRC2P26717 231 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 HTR1BP28222 390 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ARCN1P48444 511 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 GCLMP48507 274 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 ZNF157P51786 506 aaPredicted RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 AKR1D1P51857 326 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 SMSP52788 366 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PLA2G16P53816 162 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 RAB15P59190 212 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 YBX1P67809 324 aaKnown RBP3.75□□□□□ -1.81
MCF2-210ENST00000536274 GPC5P78333 572 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 PLIN5Q00G26 463 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 CD83Q01151 205 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 TNFAIP2Q03169 654 aa3.75□□□□□ -1.81
MCF2-210ENST00000536274 OCA2Q04671 838 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms