RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 HNRNPKP61978 463 aaKnown RBP eCLIP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 ILKQ13418 452 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 TDRD12Q587J7 1177 aaKnown RBP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 TXNRD3NBQ6F5E7 133 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 ZSCAN30Q86W11 494 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 DCP2Q8IU60 420 aaKnown RBP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 CXorf40AQ8TE69 158 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 RFFLQ8WZ73 363 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 NXPE2Q96DL1 559 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 BTBD6Q96KE9 485 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 PCDH12Q9NPG4 1184 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 ETNK2Q9NVF9 386 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 ATRXP46100 2492 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 MGAQ8IWI9 3026 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 ARHGAP42A6NI28 874 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 EIF3CLB5ME19 914 aaKnown RBP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 TM7SF2O76062 418 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 CDK4P11802 303 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 JUNDP17535 347 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 UGP2Q16851 508 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 COL28A1Q2UY09 1125 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 DEFB133Q30KQ1 61 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 HNRNPLLQ8WVV9 542 aaKnown RBP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 CRELD1Q96HD1 420 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 EIF3CQ99613 913 aaKnown RBP15.5■□□□□ 0.07
PAAF1-207ENST00000536003 EDEM3Q9BZQ6 932 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 THAP2Q9H0W7 228 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 SUV39H2Q9H5I1 410 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 PCDHB1Q9Y5F3 818 aa15.5■□□□□ 0.07
PAAF1-207ENST00000536003 ATMQ13315 3056 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 A0A1W2PQJ5 194 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 TTC24A2A3L6 582 aaPredicted RBP15.49■□□□□ 0.07
PAAF1-207ENST00000536003 CASC3O15234 703 aaKnown RBP15.49■□□□□ 0.07
PAAF1-207ENST00000536003 DAPK3O43293 454 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 AQP9O43315 295 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 GCATO75600 419 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 PALMO75781 387 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 CELA2BP08218 269 aaPredicted RBP15.49■□□□□ 0.07
PAAF1-207ENST00000536003 C6P13671 934 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 DPYSL2Q16555 572 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 TMEM52BQ4KMG9 183 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 KCTD16Q68DU8 428 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 DCBLD1Q8N8Z6 715 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 TRIM11Q96F44 468 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 LRRC61Q9BV99 259 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 ZWILCHQ9H900 591 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 SP110Q9HB58 689 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.49■□□□□ 0.07
PAAF1-207ENST00000536003 APOBEC3BQ9UH17 382 aaKnown RBP15.49■□□□□ 0.07
PAAF1-207ENST00000536003 IPO11Q9UI26 975 aaKnown RBP15.49■□□□□ 0.07
PAAF1-207ENST00000536003 CLCA2Q9UQC9 943 aa15.49■□□□□ 0.07
PAAF1-207ENST00000536003 KALRNO60229 2985 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 A0A087X0T9 212 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 H3BM21 787 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 RIOK3O14730 519 aaKnown RBP15.48■□□□□ 0.07
PAAF1-207ENST00000536003 TLX3O43711 291 aaPredicted RBP15.48■□□□□ 0.07
PAAF1-207ENST00000536003 GYPCP04921 128 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 FAM228BP0C875 321 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 MYBL1P10243 752 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 ALPPL2P10696 532 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 PCK1P35558 622 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 THOP1P52888 689 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 ELP6Q0PNE2 266 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 TCEA2Q15560 299 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 WSCD2Q2TBF2 565 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 HS1BP3Q53T59 392 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 MACC1Q6ZN28 852 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 PSTKQ8IV42 348 aaKnown RBP15.48■□□□□ 0.07
PAAF1-207ENST00000536003 FAM181AQ8N9Y4 354 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 LMX1AQ8TE12 382 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 HSPH1Q92598 858 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.48■□□□□ 0.07
PAAF1-207ENST00000536003 CINPQ9BW66 212 aaPredicted RBP15.48■□□□□ 0.07
PAAF1-207ENST00000536003 PTPRQQ9UMZ3 2332 aa15.48■□□□□ 0.07
PAAF1-207ENST00000536003 KIF26BQ2KJY2 2108 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 NEMP2A6NFY4 417 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 XPAP23025 273 aaPredicted RBP15.47■□□□□ 0.07
PAAF1-207ENST00000536003 EIF4A3P38919 411 aaKnown RBP15.47■□□□□ 0.07
PAAF1-207ENST00000536003 LIG3P49916 1009 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 UBASH3AP57075 661 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 SLC25A11Q02978 314 aaKnown RBP15.47■□□□□ 0.07
PAAF1-207ENST00000536003 SLC10A7Q0GE19 358 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 RALGDSQ12967 914 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 C1orf61Q13536 156 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 CDKN3Q16667 212 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 PRRT3Q5FWE3 981 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 ZCCHC8Q6NZY4 707 aaKnown RBP15.47■□□□□ 0.07
PAAF1-207ENST00000536003 GUSBP11Q6P575 273 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 BRAT1Q6PJG6 821 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 POLNQ7Z5Q5 900 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 SRLQ86TD4 932 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 CPNE8Q86YQ8 564 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 PHACTR4Q8IZ21 702 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 ECHDC3Q96DC8 303 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 ZNF641Q96N77 438 aaPredicted RBP15.47■□□□□ 0.07
PAAF1-207ENST00000536003 DCBLD2Q96PD2 775 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 CSPG4P5Q96PW8 444 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 TUBGCP5Q96RT8 1024 aa15.47■□□□□ 0.07
PAAF1-207ENST00000536003 MRPL47Q9HD33 250 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms