RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PAF1Q8N7H5 531 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 FBF1Q8TES7 1133 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 FRS2Q8WU20 508 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 CHFRQ96EP1 664 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 MYO19Q96H55 970 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 PKNOX2Q96KN3 472 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 RPS6KL1Q9Y6S9 549 aa23.11■■□□□ 1.29
RBFOX1-206ENST00000535565 EXOC1LA0A1B0GW35 172 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 HEATR9A2RTY3 570 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 TTC34A8MYJ7 566 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 AGPSO00116 658 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 USP1O94782 785 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ADRA1DP25100 572 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 LAMB3Q13751 1172 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 CRYMQ14894 314 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 E2F5Q15329 346 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 KLHL38Q2WGJ6 581 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 HSP90B2PQ58FF3 399 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ARMC12Q5T9G4 340 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 SLC44A3Q8N4M1 653 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 LPCAT1Q8NF37 534 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 DNASE1L2Q92874 299 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 RANBP9Q96S59 729 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 KIFC1Q9BW19 673 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 CPEB1Q9BZB8 566 aaKnown RBP23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ROPN1BQ9BZX4 212 aaPredicted RBP23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ACSS3Q9H6R3 686 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ROPN1Q9HAT0 212 aaPredicted RBP23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 MRM3Q9HC36 420 aaKnown RBP23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 TCRBV9S1A1TA0A576 114 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 SOX9P48436 509 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 EPHB1P54762 984 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 SEPT6Q14141 434 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 KRT71Q3SY84 523 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 PKN3Q6P5Z2 889 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 DPY19L3Q6ZPD9 716 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 TMEM135Q86UB9 458 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 CAMK1DQ8IU85 385 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 OR2A12Q8NGT7 310 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ZNF669Q96BR6 464 aaPredicted RBP23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ZBTB9Q96C00 473 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 CYTH2Q99418 400 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 P2RY13Q9BPV8 354 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 TMEM109Q9BVC6 243 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 ZDHHC6Q9H6R6 413 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 PPCSQ9HAB8 311 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 CHRAC1Q9NRG0 131 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 RABGEF1Q9UJ41 708 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 TCAF1Q9Y4C2 921 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 PCDHB9Q9Y5E1 797 aa23.1■■□□□ 1.29
RBFOX1-206ENST00000535565 PGLSO95336 258 aa23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 PIGNO95427 931 aa23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 PDHA1P08559 390 aa23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 MYZAPP0CAP1 466 aa23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 RPL26P61254 145 aaKnown RBP23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 TRIM56Q9BRZ2 755 aaKnown RBP23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 PRKAG3Q9UGI9 489 aa23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 RPL26L1Q9UNX3 145 aaKnown RBP23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 SPTBN5Q9NRC6 3674 aaKnown RBP23.09■■□□□ 1.29
RBFOX1-206ENST00000535565 ANKRD66B4E2M5 251 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 WASH3PC4AMC7 463 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 RASGRF2O14827 1237 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 HTRA2O43464 458 aaPredicted RBP23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 FZD6O60353 706 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 TCEA3O75764 348 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 PRLP01236 227 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 GKP32189 559 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 GRIA4P48058 902 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 ZNF234Q14588 700 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 ANKRD20A4Q4UJ75 823 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 CYS1Q717R9 158 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 BLOC1S5Q8TDH9 187 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 ZNF641Q96N77 438 aaPredicted RBP23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 HEPHQ9BQS7 1158 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 C8orf33Q9H7E9 229 aaPredicted RBP23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 PLAC1Q9HBJ0 212 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 MED4Q9NPJ6 270 aa23.08■■□□□ 1.29
RBFOX1-206ENST00000535565 SPECC1L-ADORA2AF8WAN1 911 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 TRAFD1O14545 582 aaPredicted RBP23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 CTHP32929 405 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 GALK1P51570 392 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 PFKPQ01813 784 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 LONRF1Q17RB8 773 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 SERPINA13PQ6UXR4 307 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 NLRP9Q7RTR0 991 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 RALGPS2Q86X27 583 aaPredicted RBP23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 BRSK1Q8TDC3 778 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 SH3GL2Q99962 352 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 FETUBQ9UGM5 382 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 FAM169AQ9Y6X4 670 aa23.07■■□□□ 1.28
RBFOX1-206ENST00000535565 EDDM13A0A1B0GTR0 161 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 A0A1W2PQ67 120 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 TLDC2A0PJX2 215 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 SMIM23A6NLE4 172 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 ALDH1A2O94788 518 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 PAMP19021 973 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 PRKCHP24723 683 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 TNFRSF4P43489 277 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 MSLNQ13421 630 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms