RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 LRRC73Q5JTD7 316 aa19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 CAVIN1Q6NZI2 390 aaKnown RBP19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 ARHGAP12Q8IWW6 846 aa19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 NETO2Q8NC67 525 aa19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 HNRNPLLQ8WVV9 542 aaKnown RBP19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 KCTD15Q96SI1 283 aaPredicted RBP19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 TRIM7Q9C029 511 aa19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 CNOT8Q9UFF9 292 aaKnown RBP19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 PCSK1NQ9UHG2 260 aa19.02■□□□□ 0.64
NDUFS3-213ENST00000534716 IGSF10Q6WRI0 2623 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 PRPSAP2O60256 369 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 BUB1BO60566 1050 aaPredicted RBP19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 LRCH4O75427 683 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 NEBLO76041 1014 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 PIGNO95427 931 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 ERCC2P18074 760 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 ITIH2P19823 946 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 PCK1P35558 622 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 NSUN2Q08J23 767 aaKnown RBP eCLIP19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 RFTN1Q14699 578 aaPredicted RBP19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 KLHL40Q2TBA0 621 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 MACC1Q6ZN28 852 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 PDZD3Q86UT5 571 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 VPS36Q86VN1 386 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 CELF6Q96J87 481 aaKnown RBP19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 EXOC2Q96KP1 924 aa19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 MRPL47Q9HD33 250 aaKnown RBP19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 MBNL1Q9NR56 388 aaKnown RBP19.01■□□□□ 0.63
NDUFS3-213ENST00000534716 ADAMTS20P59510 1910 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 GOLGA4Q13439 2230 aaKnown RBP19■□□□□ 0.63
NDUFS3-213ENST00000534716 CFAP69A5D8W1 941 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 DAPK3O43293 454 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 PEX5P50542 639 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 THOP1P52888 689 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 IL10RBQ08334 325 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 DPYSQ14117 519 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 KDM7AQ6ZMT4 941 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 LZTR1Q8N653 840 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 SNIP1Q8TAD8 396 aaKnown RBP19■□□□□ 0.63
NDUFS3-213ENST00000534716 SYN2Q92777 582 aaPredicted RBP19■□□□□ 0.63
NDUFS3-213ENST00000534716 WRAP53Q9BUR4 548 aaKnown RBP19■□□□□ 0.63
NDUFS3-213ENST00000534716 PCDH12Q9NPG4 1184 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 SPASTQ9UBP0 616 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 PNMA8BQ9ULN7 279 aaPredicted RBP19■□□□□ 0.63
NDUFS3-213ENST00000534716 AK5Q9Y6K8 562 aa19■□□□□ 0.63
NDUFS3-213ENST00000534716 A0A1W2PQJ5 194 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 TMEM110-MUSTN1A8MSY1 372 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 LMO7DNF2Z398 122 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 PALMO75781 387 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 SERPINC1P01008 464 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 C6P13671 934 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 XPAP23025 273 aaPredicted RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 EIF4A3P38919 411 aaKnown RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 MMP12P39900 470 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 PBX1P40424 430 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 EIF2S3P41091 472 aaKnown RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 LRRC14Q15048 493 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 WSCD2Q2TBF2 565 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 HGSNATQ68CP4 663 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 ERAP2Q6P179 960 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 SRLQ86TD4 932 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 NPWQ8N729 165 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 TSEN2Q8NCE0 465 aaKnown RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 LMX1AQ8TE12 382 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 SPOCK2Q92563 424 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 ZNF653Q96CK0 615 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 ECHDC3Q96DC8 303 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 BOCQ9BWV1 1114 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 ATP13A3Q9H7F0 1226 aa18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 CWC15Q9P013 229 aaKnown RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 APOBEC3BQ9UH17 382 aaKnown RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 BZW2Q9Y6E2 419 aaKnown RBP18.99■□□□□ 0.63
NDUFS3-213ENST00000534716 KNTC1P50748 2209 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 EME2A4GXA9 379 aaPredicted RBP18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 TLX3O43711 291 aaPredicted RBP18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 GCATO75600 419 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 SKILP12757 684 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 SERPINA4P29622 427 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 RGRP47804 291 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 SEMG2Q02383 582 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 IRF4Q15306 451 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 DPYSL2Q16555 572 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 PPP6R3Q5H9R7 873 aaPredicted RBP18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 ZSWIM9Q86XI8 627 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 CAMK1DQ8IU85 385 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 PHACTR4Q8IZ21 702 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 IFI44Q8TCB0 444 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 COL26A1Q96A83 441 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 ZNF599Q96NL3 588 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 DEPDC7Q96QD5 511 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 IL12RB2Q99665 862 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 LRRC61Q9BV99 259 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 SLC13A1Q9BZW2 595 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 ATP8A1Q9Y2Q0 1164 aa18.98■□□□□ 0.63
NDUFS3-213ENST00000534716 MYF5P13349 255 aa18.97■□□□□ 0.63
NDUFS3-213ENST00000534716 IL1R2P27930 398 aa18.97■□□□□ 0.63
NDUFS3-213ENST00000534716 LIG3P49916 1009 aa18.97■□□□□ 0.63
NDUFS3-213ENST00000534716 BLKP51451 505 aa18.97■□□□□ 0.63
NDUFS3-213ENST00000534716 DEFB133Q30KQ1 61 aa18.97■□□□□ 0.63
NDUFS3-213ENST00000534716 BOLA3Q53S33 107 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms