RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 KLQ9UEF7 1012 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TRIM64A6NGJ6 449 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TRIM64BA6NI03 449 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 EPHB6O15197 1021 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CSDE1O75534 798 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PGM3O95394 542 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 GJB6O95452 261 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 FGF1P05230 155 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TFEBP19484 476 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TPSB2P20231 275 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HTR7P34969 479 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TPSAB1Q15661 275 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PSMD5Q16401 504 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 FSCN1Q16658 493 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HLA-DQA1Q5Y7H0 255 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PAGE2Q7Z2X7 111 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 R3HCC1LQ7Z5L2 792 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TOP6BLQ8N6T0 577 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MAGEE2Q8TD90 523 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PTCD2Q8WV60 388 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 RASSF5Q8WWW0 418 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 NELL1Q92832 810 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SEMA4DQ92854 862 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CDH19Q9H159 772 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CDT1Q9H211 546 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SSU72Q9NP77 194 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 DNMT3LQ9UJW3 386 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF180Q9UJW8 692 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF232Q9UNY5 417 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 RCCD1A6NED2 376 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SMIM22K7EJ46 135 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SNPHO15079 494 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ADCY6O43306 1168 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 USP12O75317 370 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TPPPO94811 219 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 FTH1P02794 183 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CHKAP35790 457 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 GRM5P41594 1212 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PTP4A2Q12974 167 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 AADACL2Q6P093 401 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 NPNTQ6UXI9 565 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 DNAJC14Q6Y2X3 702 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 STRADAQ7RTN6 431 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TTC7BQ86TV6 843 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PIGZQ86VD9 579 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 GPC2Q8N158 579 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MROH1Q8NDA8 1641 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MYLPFQ96A32 169 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 NDNQ99608 321 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 WDR18Q9BV38 432 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ATXN3LQ9H3M9 355 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PRDM12Q9H4Q4 367 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PIH1D1Q9NWS0 290 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HBS1LQ9Y450 684 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TMEM150BA6NC51 233 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 IRF6O14896 467 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 AZIN1O14977 448 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 AMHP03971 560 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 NFICP08651 508 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PTPRAP18433 802 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TLX1P31314 330 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CD86P42081 329 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MAPK9P45984 424 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ACAP2Q15057 778 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HECTD3Q5T447 861 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PACS1Q6VY07 963 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HEATR4Q86WZ0 1026 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 RTL3Q8N8U3 475 aaKnown RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ADCY4Q8NFM4 1077 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HEXDCQ8WVB3 486 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TRAPPC12Q8WVT3 735 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HPS1Q92902 700 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SLC38A2Q96QD8 506 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MCCC1Q96RQ3 725 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 RHOBTB2Q9BYZ6 727 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 VPS45Q9NRW7 570 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CPA4Q9UI42 421 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MAGEL2Q9UJ55 1249 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SPATA2Q9UM82 520 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 GMPPBQ9Y5P6 360 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 AK5Q9Y6K8 562 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 COL1A2P08123 1366 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TCRBV9S1A1TA0A576 114 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 IRGMA1A4Y4 181 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SPATA31C2B4DYI2 1134 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TSPAN3O60637 253 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 COQ9O75208 318 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TNNI3P19429 210 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 KCNJ2P63252 427 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 BNC1Q01954 994 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 CNTN2Q02246 1040 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SPIDRQ14159 915 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 KLHL12Q53G59 568 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ANXA8L1Q5VT79 327 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 METTL21CQ5VZV1 264 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 KLHL17Q6TDP4 642 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 OR52L1Q8NGH7 329 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 FBXO30Q8TB52 745 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 RHOJQ9H4E5 214 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ATP13A3Q9H7F0 1226 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms