RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 ARRDC2Q8TBH0 407 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 GRK7Q8WTQ7 553 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 SPOCK2Q92563 424 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 ZNF419Q96HQ0 510 aaPredicted RBP11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 MS4A14Q96JA4 679 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 CAPZA3Q96KX2 299 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 GPR174Q9BXC1 333 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 FSD1LQ9BXM9 530 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 NEUROG2Q9H2A3 272 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 EPC1Q9H2F5 836 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 SERGEFQ9UGK8 458 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 INVSQ9Y283 1065 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 DRG1Q9Y295 367 aaKnown RBP11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 AAR2Q9Y312 384 aaKnown RBP11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 RAI2Q9Y5P3 530 aa11.94□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3DA0A087WVF3 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3IA0A087WXS9 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3EA0A087X179 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3KA0A087X1G2 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3FA6NER0 549 aaPredicted RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 FAM47DPA6NHR8 397 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 MEI4A8MW99 385 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3LB9A6J9 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 ZNF185O15231 689 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 HTRA2O43464 458 aaPredicted RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 HRO43593 1189 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TSPAN6O43657 245 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 PHF2O75151 1096 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 GCATO75600 419 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 PCDH8O95206 1070 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 PGLSO95336 258 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 GAS8O95995 478 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 IFNB1P01574 187 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3HP0C7X1 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 ACSL1P33121 698 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 NUDT1P36639 197 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 FNTAP49354 379 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 MPP3Q13368 585 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 SIX1Q15475 284 aaPredicted RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 UGP2Q16851 508 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3GQ6DHY5 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3CQ6IPX1 549 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 KIAA1161Q6NSJ0 714 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TBC1D3Q8IZP1 549 aaPredicted RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 PRELID2Q8N945 189 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 C12orf50Q8NA57 414 aaPredicted RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 ZNF592Q92610 1267 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 MAGOHBQ96A72 148 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 FAM131CQ96AQ9 280 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 ECHDC3Q96DC8 303 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 RTP4Q96DX8 246 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 ZC3H10Q96K80 434 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 RUNDC3BQ96NL0 473 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 FCRL5Q96RD9 977 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 AP1M1Q9BXS5 423 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TDRD1Q9BXT4 1180 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 C10orf88Q9H8K7 445 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 USP29Q9HBJ7 922 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 PCDH9Q9HC56 1237 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 FAM153AQ9UHL3 310 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 PHTF1Q9UMS5 762 aa11.93□□□□□ -0.5
PPFIA1-220ENST00000532024 TTC24A2A3L6 582 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PRR23AA6NEV1 266 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 E7EVH7 732 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CCDC188H7C350 402 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PLK4O00444 970 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 TRAFD1O14545 582 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PSMD3O43242 534 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 GJB3O75712 270 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CYP2A6P11509 494 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 NBL1P41271 181 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 GRIA4P48058 902 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 DHPSP49366 369 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CCR5P51681 352 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 METAP1P53582 386 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 RPS21P63220 83 aaKnown RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 FAM193AP78312 1265 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 SKOR1P84550 965 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 TRAF2Q12933 501 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 SRSF5Q13243 272 aaKnown RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PCSK7Q16549 785 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CYP1B1Q16678 543 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PARP6Q2NL67 630 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PLK5Q496M5 336 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 SETMARQ53H47 684 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 LYSMD4Q5XG99 296 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PMS2CLQ68D20 193 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 LAIR1Q6GTX8 287 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 RABEPKQ7Z6M1 372 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 ATL2Q8NHH9 583 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 KIF18AQ8NI77 898 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms