RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 Q6ZS52 159 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 LINC00523Q86TU6 105 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 TRIM56Q9BRZ2 755 aaKnown RBP24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 FOXQ1Q9C009 403 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 SUV39H2Q9H5I1 410 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 HTRA2O43464 458 aaPredicted RBP24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 PIRTP0C851 137 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 CHRNB1P11230 501 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 MGAT1P26572 445 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 RAD51Q06609 339 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 SLC14A2Q15849 920 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 ANKMY2Q8IV38 441 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 LPCAT1Q8NF37 534 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 KLHL32Q96NJ5 620 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 XAB2Q9HCS7 855 aaKnown RBP24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 SAYSD1Q9NPB0 183 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 SUN2Q9UH99 717 aa24.92■■□□□ 1.58
LDLRAD3-203ENST00000528989 A0A0U1RQS6 177 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 PGLSO95336 258 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 EPOP01588 193 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 SERPINA4P29622 427 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 STARD6P59095 220 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 CDH17Q12864 832 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 FBXO38Q6PIJ6 1188 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 GDPD4Q6W3E5 623 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 UBALD2Q8IYN6 164 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 ZBED8Q8IZ13 594 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 RMDN1Q96DB5 314 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 SIGLEC10Q96LC7 697 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 TUBGCP5Q96RT8 1024 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 ARNT2Q9HBZ2 717 aa24.91■■□□□ 1.58
LDLRAD3-203ENST00000528989 NDST3O95803 873 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 MLNP12872 115 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 MSLNQ13421 630 aaPredicted RBP24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 FZD5Q13467 585 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 ELAVL3Q14576 367 aaKnown RBP24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 UBXN2BQ14CS0 331 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 BRD3Q15059 726 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 ARMC12Q5T9G4 340 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 CACUL1Q86Y37 369 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 MMAAQ8IVH4 418 aaKnown RBP24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 KCNV2Q8TDN2 545 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 PIH1D2Q8WWB5 315 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 GABRG3Q99928 467 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 SYBUQ9NX95 663 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 PPM1HQ9ULR3 514 aa24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 ARIH1Q9Y4X5 557 aaPredicted RBP24.9■■□□□ 1.58
LDLRAD3-203ENST00000528989 CCDC151A5D8V7 595 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 ANKRD66B4E2M5 251 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 NPC1O15118 1278 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 PPFIA2O75334 1257 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 MRPS21P82921 87 aaKnown RBP24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 FBXO43Q4G163 708 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 CCDC38Q502W7 563 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 LRRC73Q5JTD7 316 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 CENPUQ71F23 418 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 OR8D1Q8WZ84 308 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 C9orf72Q96LT7 481 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 LMAN1LQ9HAT1 526 aa24.89■■□□□ 1.58
LDLRAD3-203ENST00000528989 ANKRD36A6QL64 1941 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 A0A1W2PQF6 199 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 KANSL1LA0AUZ9 987 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 FAM170BA6NMN3 283 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 E7ESA3 106 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 SOCS5O75159 536 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 H2AFXP16104 143 aaPredicted RBP24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 COL9A1P20849 921 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 ELK3P41970 407 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 TNNT3P45378 269 aaPredicted RBP24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 POU6F1Q14863 301 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 TMC3Q7Z5M5 1100 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 PAF1Q8N7H5 531 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.89■■□□□ 1.571e-7■■■■■ 87.1
LDLRAD3-203ENST00000528989 ECHDC3Q96DC8 303 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 ZNF641Q96N77 438 aaPredicted RBP24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 SEMA4AQ9H3S1 761 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 LTB4R2Q9NPC1 389 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 BPTFQ12830 3046 aa24.89■■□□□ 1.57
LDLRAD3-203ENST00000528989 SYNCRIPO60506 623 aaKnown RBP24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 IL1BP01584 269 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 ALPIP09923 528 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 CTPS1P17812 591 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 HLA-DPA1P20036 260 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 SEMG2Q02383 582 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 CAMK2GQ13555 558 aaPredicted RBP24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 QPCTQ16769 361 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 SDE2Q6IQ49 451 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 PIP4K2CQ8TBX8 421 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 ADGRE3Q9BY15 652 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 FRMD8Q9BZ67 464 aaPredicted RBP24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 TXLNGYQ9BZA5 131 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 CHMP2BQ9UQN3 213 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 TEX264Q9Y6I9 313 aa24.88■■□□□ 1.57
LDLRAD3-203ENST00000528989 SDR42E2A6NKP2 422 aa24.87■■□□□ 1.57
LDLRAD3-203ENST00000528989 PLK4O00444 970 aa24.87■■□□□ 1.57
LDLRAD3-203ENST00000528989 KPNA3O00505 521 aaPredicted RBP24.87■■□□□ 1.57
LDLRAD3-203ENST00000528989 HOXB2P14652 356 aa24.87■■□□□ 1.57
LDLRAD3-203ENST00000528989 MAGEA4P43358 317 aa24.87■■□□□ 1.57
LDLRAD3-203ENST00000528989 EPHB1P54762 984 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms