RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 FATE1Q969F0 183 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CENPTQ96BT3 561 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 FAF2Q96CS3 445 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ECHDC3Q96DC8 303 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 KLF6Q99612 283 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 C1QTNF7Q9BXJ2 289 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CALN1Q9BXU9 219 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 FZD3Q9NPG1 666 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 GPR27Q9NS67 375 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CA5BQ9Y2D0 317 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 BTBD3Q9Y2F9 522 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ARID1BQ8NFD5 2236 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 FAM221BA6H8Z2 402 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 MMP20O60882 483 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 TM7SF2O76062 418 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 DKK1O94907 266 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 FTH1P19P0C7X4 201 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 CR2P20023 1033 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 KDELR1P24390 212 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 SLC1A1P43005 524 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 MAGEA1P43355 309 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 RABIFP47224 123 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 SCNN1BP51168 640 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 HADHBP55084 474 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 CLDN2P57739 230 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 IL9RQ01113 521 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 GALNT2Q10471 571 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZNF235Q14590 738 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 AGERQ15109 404 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 NCBP2-AS2Q69YL0 99 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 TIGD7Q6NT04 549 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 ERAP2Q6P179 960 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 KANSL1Q7Z3B3 1105 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 GATAD2AQ86YP4 633 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 CPNE8Q86YQ8 564 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 TEX26Q8N6G2 289 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 OR13H1Q8NG92 308 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 ADAMTS14Q8WXS8 1223 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 TSGA13Q96PP4 275 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 NUDCD1Q96RS6 583 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 MYOCQ99972 504 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 ITM2BQ9Y287 266 aa12.22□□□□□ -0.45
TRAPPC4-209ENST00000528230 POM121BA6NF01 834 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 TRAFD1O14545 582 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 MUSKO15146 869 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 RAD51BO15315 384 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 SOCS5O75159 536 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 ITIH2P19823 946 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 MX2P20592 715 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 CCNCP24863 283 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 CYLC1P35663 651 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 GJC1P36383 396 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 GARSP41250 739 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 MMP13P45452 471 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 PFN3P60673 137 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 YPEL5P62699 121 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 BNIP3Q12983 259 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZFYVE27Q5T4F4 411 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 SLCO6A1Q86UG4 719 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 PGBD5Q8N414 524 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 RNF157Q96PX1 679 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 PANX2Q96RD6 677 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 SCNM1Q9BWG6 230 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 LUC7LQ9NQ29 371 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 AMACRQ9UHK6 382 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.45
TRAPPC4-209ENST00000528230 PTPRBP23467 1997 aa12.21□□□□□ -0.46
TRAPPC4-209ENST00000528230 SPTY2D1-AS1A0A0U1RR47 76 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 MATN3O15232 486 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 HTRA2O43464 458 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 MFSD11O43934 449 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 LDOC1O95751 146 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 ATXN1LP0C7T5 689 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 CDK4P11802 303 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 CES1P23141 567 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 NFKBIAP25963 317 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 MMP12P39900 470 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 SPA17Q15506 151 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 LRRC73Q5JTD7 316 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 PTAR1Q7Z6K3 402 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 ZSWIM9Q86XI8 627 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 GAS2L3Q86XJ1 694 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 TMTC1Q8IUR5 882 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 RHOT1Q8IXI2 618 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 SLC22A18ASQ8N1D0 253 aa12.2□□□□□ -0.46
TRAPPC4-209ENST00000528230 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms