RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
CD44-227ENST00000528086 CBFA2T2O43439 604 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 TSPAN6O43657 245 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 PALMO75781 387 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 H2AFZP0C0S5 128 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 ZNF135P52742 658 aaPredicted RBP10.76□□□□□ -0.69
CD44-227ENST00000528086 CDH6P55285 790 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 OVGP1Q12889 678 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 EIF2B5Q13144 721 aaKnown RBP10.76□□□□□ -0.69
CD44-227ENST00000528086 DNAJC3Q13217 504 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 TRIM14Q14142 442 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 STAT4Q14765 748 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 TCEAL1Q15170 157 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 UGP2Q16851 508 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 WSCD2Q2TBF2 565 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 KYAT3Q6YP21 454 aaKnown RBP10.76□□□□□ -0.69
CD44-227ENST00000528086 H2AFVQ71UI9 128 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 TTC7BQ86TV6 843 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 VPS36Q86VN1 386 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 TEX26Q8N6G2 289 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 EID2Q8N6I1 236 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 SLC35G2Q8TBE7 412 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 ASB12Q8WXK4 309 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 FEM1CQ96JP0 617 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 NCAPGQ9BPX3 1015 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 TCEAL2Q9H3H9 227 aaPredicted RBP10.76□□□□□ -0.69
CD44-227ENST00000528086 CTTNBP2NLQ9P2B4 639 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 UVRAGQ9P2Y5 699 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 SALL4Q9UJQ4 1053 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 HYOU1Q9Y4L1 999 aa10.76□□□□□ -0.69
CD44-227ENST00000528086 APC2O95996 2303 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 RCCD1A6NED2 376 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 TAF4O00268 1085 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 CASC3O15234 703 aaKnown RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 DAPK3O43293 454 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 HTRA2O43464 458 aaPredicted RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 DFNA5O60443 496 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 PIAS2O75928 621 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 MYF5P13349 255 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 FECHP22830 423 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 DGKAP23743 735 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 AKT2P31751 481 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 MAN1A1P33908 653 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 MMP12P39900 470 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 GRK6P43250 576 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 MAXP61244 160 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 GBE1Q04446 702 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 NSUN2Q08J23 767 aaKnown RBP eCLIP10.75□□□□□ -0.69
CD44-227ENST00000528086 GALNT2Q10471 571 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 TRAF2Q12933 501 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 HNRNPDQ14103 355 aaKnown RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 LBRQ14739 615 aaKnown RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 PAFAH1B3Q15102 231 aaKnown RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 ANKRD20A8PQ5CZ79 823 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 TMCO3Q6UWJ1 677 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 CBARPQ8N350 705 aaPredicted RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 LZTR1Q8N653 840 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 HCAR2Q8TDS4 363 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 SPOCK2Q92563 424 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 MAML1Q92585 1016 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 MGME1Q9BQP7 344 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 WRAP53Q9BUR4 548 aaKnown RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 GOLPH3Q9H4A6 298 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 SP110Q9HB58 689 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 NOD2Q9HC29 1040 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 RCOR3Q9P2K3 495 aaPredicted RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 REXO2Q9Y3B8 237 aaKnown RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 NEUROG3Q9Y4Z2 214 aa10.75□□□□□ -0.69
CD44-227ENST00000528086 ARHGEF17Q96PE2 2063 aaPredicted RBP10.75□□□□□ -0.69
CD44-227ENST00000528086 SPTY2D1-AS1A0A0U1RR47 76 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 TMEM110-MUSTN1A8MSY1 372 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 TNFSF14O43557 240 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 AKR1B10O60218 316 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 NEBLO76041 1014 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 LCA5LO95447 670 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 PRLP01236 227 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 C6P13671 934 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 KDELR1P24390 212 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 GJC1P36383 396 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 ARL4AP40617 200 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 ACADVLP49748 655 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 ZNF75DP51815 510 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 MESDQ14696 234 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 RFTN1Q14699 578 aaPredicted RBP10.74□□□□□ -0.69
CD44-227ENST00000528086 IRF4Q15306 451 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 TMCO4Q5TGY1 634 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 CCNI2Q6ZMN8 369 aaPredicted RBP10.74□□□□□ -0.69
CD44-227ENST00000528086 RFLNAQ6ZTI6 216 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 PLD5Q8N7P1 536 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 PLA2G15Q8NCC3 412 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 CTNNBL1Q8WYA6 563 aaPredicted RBP10.74□□□□□ -0.69
CD44-227ENST00000528086 ZNF641Q96N77 438 aaPredicted RBP10.74□□□□□ -0.69
CD44-227ENST00000528086 ZNF599Q96NL3 588 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 TUBGCP5Q96RT8 1024 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 CDC6Q99741 560 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 CALN1Q9BXU9 219 aa10.74□□□□□ -0.69
CD44-227ENST00000528086 PCDHGC4Q9Y5F7 938 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms