RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 M0QYV0 167 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 CLDN11O75508 207 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 RPL34P49207 117 aaKnown RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 PMS2P54278 862 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 MCCD1P59942 119 aaPredicted RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 TRA2AQ13595 282 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 CUL2Q13617 745 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 NR1D2Q14995 579 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 KLHL40Q2TBA0 621 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 WSCD2Q2TBF2 565 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 NKAIN2Q5VXU1 208 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 TAF8Q7Z7C8 310 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 NRSN1Q8IZ57 195 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 DCAF4L2Q8NA75 395 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 FBXL13Q8NEE6 735 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 CCDC112Q8NEF3 446 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 OR6K2Q8NGY2 324 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 OR1E3Q8WZA6 343 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 RAB7BQ96AH8 199 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 INTS2Q9H0H0 1204 aaKnown RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 ZDHHC6Q9H6R6 413 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 KLQ9UEF7 1012 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 COQ6Q9Y2Z9 468 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
SSRP1-203ENST00000526696 OR1A2Q9Y585 309 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 DGKBQ9Y6T7 804 aa13.65□□□□□ -0.22
SSRP1-203ENST00000526696 MDC1Q14676 2089 aaKnown RBP13.64□□□□□ -0.23
SSRP1-203ENST00000526696 A0A1B0GTL3 188 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 TM7SF2O76062 418 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 RHOCP08134 193 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 CSTF2P33240 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
SSRP1-203ENST00000526696 STAT5AP42229 794 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 DNA2P51530 1060 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
SSRP1-203ENST00000526696 CDH4P55283 916 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 FAM129CQ86XR2 697 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 XYLT1Q86Y38 959 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 TP53INP2Q8IXH6 220 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 GRAMD1CQ8IYS0 662 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 Q8NA96 180 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 OR7D4Q8NG98 312 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 OR4D9Q8NGE8 314 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 APOOQ9BUR5 198 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 TMEM168Q9H0V1 697 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 DPEP2Q9H4A9 486 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 MRPL40Q9NQ50 206 aaKnown RBP13.64□□□□□ -0.23
SSRP1-203ENST00000526696 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 SLC5A6Q9Y289 635 aa13.64□□□□□ -0.23
SSRP1-203ENST00000526696 TMEM184BQ9Y519 407 aaPredicted RBP13.64□□□□□ -0.23
SSRP1-203ENST00000526696 OAS3Q9Y6K5 1087 aaKnown RBP13.64□□□□□ -0.23
SSRP1-203ENST00000526696 SYNJ2BP-COX16A0A087WUM0 186 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 TMEM110-MUSTN1A8MSY1 372 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 RNF225M0QZC1 329 aaPredicted RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 STK17BO94768 372 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 DLGAP3O95886 979 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 CD160O95971 181 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 TNFP01375 233 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 BMP6P22004 513 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 BRD2P25440 801 aaKnown RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 GTF2H1P32780 548 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 SERPINH1P50454 418 aaKnown RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 MXI1P50539 228 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 RAB15P59190 212 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 ERV3-1Q14264 604 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 TAF5Q15542 800 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 CNGA2Q16280 664 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 CLPPQ16740 277 aaPredicted RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 ZNF805Q5CZA5 627 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 ARTNQ5T4W7 220 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 KDELC2Q7Z4H8 507 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 IRF2BP1Q8IU81 584 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 MCEMP1Q8IX19 187 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 PCDH20Q8N6Y1 951 aaKnown RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 IQUBQ8NA54 791 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 RNF31Q96EP0 1072 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 C5orf34Q96MH7 638 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 WRAP53Q9BUR4 548 aaKnown RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 TM6SF2Q9BZW4 377 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 CEP44Q9C0F1 390 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 FGF22Q9HCT0 170 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 APMAPQ9HDC9 416 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 SPATS2LQ9NUQ6 558 aaKnown RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 COX16Q9P0S2 106 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 LUZP4Q9P127 313 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 HECAQ9UBI9 543 aaPredicted RBP13.63□□□□□ -0.23
SSRP1-203ENST00000526696 SLC12A6Q9UHW9 1150 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 KIAA1257Q9ULG3 409 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 ENTPD4Q9Y227 616 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 TRAF3IP3Q9Y228 551 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 POLHQ9Y253 713 aa13.63□□□□□ -0.23
SSRP1-203ENST00000526696 SNX10Q9Y5X0 201 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms