RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 SERPINH1P50454 418 aaKnown RBP20.53■□□□□ 0.88
SMIM3-201ENST00000526627 SLC12A2P55011 1212 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 PKNOX1P55347 436 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 MS4A2Q01362 244 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 ALFQ53S48 1182 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 PQLC1Q8N2U9 271 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 FATE1Q969F0 183 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 ZCWPW1Q9H0M4 648 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 WDR41Q9HAD4 459 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 ABI2Q9NYB9 513 aaPredicted RBP20.53■□□□□ 0.88
SMIM3-201ENST00000526627 CCDC189A1A4V9 331 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 ENO4A6NNW6 628 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 A8MT66 165 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 STX16-NPEPL1H3BU86 382 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 CNTN5O94779 1100 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 ARSAP15289 507 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 MSX2P35548 267 aaPredicted RBP20.53■□□□□ 0.88
SMIM3-201ENST00000526627 CD86P42081 329 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 NDST2P52849 883 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 DSC2Q02487 901 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 RFTN1Q14699 578 aaPredicted RBP20.53■□□□□ 0.88
SMIM3-201ENST00000526627 ARMC3Q5W041 872 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 CYP4F12Q9HCS2 524 aa20.53■□□□□ 0.88
SMIM3-201ENST00000526627 TRPC5OSA6NMA1 111 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 WISP3O95389 354 aaPredicted RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 RPLP2P05387 115 aaKnown RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 ENO3P13929 434 aaPredicted RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 VCLP18206 1134 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 RENBPP51606 427 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 ZNF157P51786 506 aaPredicted RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 CLCN5P51795 746 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 KPNA2P52292 529 aaKnown RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 DDR2Q16832 855 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 MS4A13Q5J8X5 152 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 CHSY3Q70JA7 882 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 MON1AQ86VX9 555 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 ZNF280BQ86YH2 543 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 RNF135Q8IUD6 432 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 HMGCLL1Q8TB92 370 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 ANKRD49Q8WVL7 239 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 USP13Q92995 863 aaPredicted RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 UBXN10Q96LJ8 280 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 TRAPPC9Q96Q05 1148 aa20.52■□□□□ 0.88
SMIM3-201ENST00000526627 C6orf203Q9P0P8 240 aaPredicted RBP20.52■□□□□ 0.88
SMIM3-201ENST00000526627 TTC24A2A3L6 582 aaPredicted RBP20.52■□□□□ 0.87
SMIM3-201ENST00000526627 SMIM24O75264 130 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 SNUPNO95149 360 aaKnown RBP20.52■□□□□ 0.87
SMIM3-201ENST00000526627 PAPSS2O95340 614 aaPredicted RBP20.52■□□□□ 0.87
SMIM3-201ENST00000526627 ASGR1P07306 291 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 FESP07332 822 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 HSPA1AP0DMV8 641 aaKnown RBP20.52■□□□□ 0.87
SMIM3-201ENST00000526627 HSPA1BP0DMV9 641 aaKnown RBP20.52■□□□□ 0.87
SMIM3-201ENST00000526627 RHOQP17081 205 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 ARSDP51689 593 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 USP46P62068 366 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 SATB1Q01826 763 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 TRIM32Q13049 653 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 FAM83EQ2M2I3 478 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 RPS27LQ71UM5 84 aaKnown RBP20.52■□□□□ 0.87
SMIM3-201ENST00000526627 CILP2Q8IUL8 1156 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 SPPL2BQ8TCT7 592 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 TADA1Q96BN2 335 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 TSC22D3Q99576 134 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 NPAS2Q99743 824 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 EFCAB1Q9HAE3 211 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 TMEM248Q9NWD8 314 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 GTSE1Q9NYZ3 720 aa20.52■□□□□ 0.87
SMIM3-201ENST00000526627 ARHGEF37A1IGU5 675 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 MROH6A6NGR9 719 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 CFLARO15519 480 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 LTA4HP09960 611 aaKnown RBP20.51■□□□□ 0.87
SMIM3-201ENST00000526627 ALDH1A3P47895 512 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 TBX4P57082 545 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 CACNB2Q08289 660 aaPredicted RBP20.51■□□□□ 0.87
SMIM3-201ENST00000526627 TRIM71Q2Q1W2 868 aaKnown RBP20.51■□□□□ 0.87
SMIM3-201ENST00000526627 HECTD2Q5U5R9 776 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 TMEM207Q6UWW9 146 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 TEX26Q8N6G2 289 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 CEP70Q8NHQ1 597 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 CALML6Q8TD86 181 aa20.51■□□□□ 0.87
SMIM3-201ENST00000526627 MTF2Q9Y483 593 aaPredicted RBP20.51■□□□□ 0.87
SMIM3-201ENST00000526627 CCL22O00626 93 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 IPO13O94829 963 aaKnown RBP20.5■□□□□ 0.87
SMIM3-201ENST00000526627 CCDC166P0CW27 439 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 FLOT2Q14254 428 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 GPR162Q16538 588 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 AGAP9Q5VTM2 703 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 FAM219BQ5XKK7 198 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 FBXL19Q6PCT2 694 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 GALNT7Q86SF2 657 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 LDB1Q86U70 411 aaPredicted RBP20.5■□□□□ 0.87
SMIM3-201ENST00000526627 NUP93Q8N1F7 819 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 PGBD5Q8N414 524 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 SH3RF2Q8TEC5 729 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 ZYG11BQ9C0D3 744 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 VPS45Q9NRW7 570 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 GMIPQ9P107 970 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 TLL2Q9Y6L7 1015 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 IGLV3-10A0A075B6K4 115 aa20.5■□□□□ 0.87
SMIM3-201ENST00000526627 OAZ2O95190 189 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms