RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CXCL16Q9H2A7 254 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 RIBC2Q9H4K1 309 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 TMEM134Q9H6X4 195 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 LMCD1Q9NZU5 365 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 MORF4L1Q9UBU8 362 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 UBQLN1Q9UMX0 589 aaKnown RBP7□□□□□ -1.29
TGFBR3-207ENST00000525962 DMTF1Q9Y222 760 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 TRAF6Q9Y4K3 522 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 PCDHB12Q9Y5F1 795 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 MICAL3Q7RTP6 2002 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
TGFBR3-207ENST00000525962 NUP98P52948 1817 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SOWAHBA6NEL2 793 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CFAP99D6REC4 459 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ABLIM1O14639 778 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 APOA4P06727 396 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SLC2A4P14672 509 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CRABP2P29373 138 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ACADSBP45954 432 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 NOVP48745 357 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 RAB10P61026 200 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 LAPTM5Q13571 262 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SIM2Q14190 667 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SAMD4BQ5PRF9 694 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 C6orf183Q5T699 404 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 NCBP2-AS2Q69YL0 99 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 KIAA1841Q6NSI8 718 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 LCLAT1Q6UWP7 414 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ARHGAP36Q6ZRI8 547 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 NANOGNBQ7Z5D8 188 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SPATA2LQ8IUW3 424 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 FAM126BQ8IXS8 530 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CPNE9Q8IYJ1 553 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CHST13Q8NET6 341 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ST13P5Q8NFI4 369 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PSMA8Q8TAA3 256 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 HPS1Q92902 700 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TSPAN17Q96FV3 270 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TBL1YQ9BQ87 522 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ASPSCR1Q9BZE9 553 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 XYLT2Q9H1B5 865 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 MROH8Q9H579 483 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CLK4Q9HAZ1 481 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 RASSF1Q9NS23 344 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 GIMAP4Q9NUV9 329 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 EBF1Q9UH73 591 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 EVLQ9UI08 416 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 OAZ3Q9UMX2 235 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SHANK3Q9BYB0 1731 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 NUMA1Q14980 2115 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 BCLAF3A2AJT9 711 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TRAFD1O14545 582 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 DLX3O60479 287 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ZNF182P17025 639 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 S100A5P33763 92 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 NR2C2P49116 596 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 NPY2RP49146 381 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ADRM1Q16186 407 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 RABL3Q5HYI8 236 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PAGE2BQ5JRK9 111 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 C10orf120Q5SQS8 335 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TRNP1Q6NT89 227 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CATSPERGQ6ZRH7 1159 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 IFNLR1Q8IU57 520 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 B3GALNT2Q8NCR0 500 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 AGBL3Q8NEM8 1001 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 MCRS1Q96EZ8 462 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CDK15Q96Q40 435 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PPP1R10Q96QC0 940 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 REXO4Q9GZR2 422 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 LHX5Q9H2C1 402 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PIGVQ9NUD9 493 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 UBAP1Q9NZ09 502 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 BLOC1S6Q9UL45 172 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PCDHGC3Q9UN70 934 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TNFSF13BQ9Y275 285 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PLCH1Q4KWH8 1693 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CACNA1SQ13698 1873 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 TMEM247A6NEH6 219 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 FAM159BA6NKW6 160 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 AURKAO14965 403 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 B4GAT1O43505 415 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PLA2G6O60733 806 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 LRATO95237 230 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 AHSGP02765 367 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 CHRM5P08912 532 aaPredicted RBP6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ALOX12P18054 663 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 AOC1P19801 751 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PTPN3P26045 913 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PCSK6P29122 969 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 ADRA1BP35368 520 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 GRIA2P42262 883 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 MATKP42679 507 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 BRCC3P46736 316 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 SERPINB10P48595 397 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 DGKEP52429 567 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 LIMK2P53671 638 aa6.99□□□□□ -1.29
TGFBR3-207ENST00000525962 PLA2G4EQ3MJ16 856 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms