RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 IFT43Q96FT9 208 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 NAF1Q96HR8 494 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 KCTD15Q96SI1 283 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 C1QTNF7Q9BXJ2 289 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 SYNDIG1Q9H7V2 258 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 NLGN3Q9NZ94 848 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 GULP1Q9UBP9 304 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 LHX3Q9UBR4 397 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 CNOT8Q9UFF9 292 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
CTNNA1-235ENST00000522730 CXorf51AA0A1B0GTR3 108 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 TMEM191CA6NGB0 347 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ARHGAP42A6NI28 874 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 WASH4PA8MWX3 477 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 DDX3XO00571 662 aaKnown RBP eCLIP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 AREL1O15033 823 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 MUSKO15146 869 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 TLX3O43711 291 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 BRINP1O60477 761 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 PRAMEF11O60813 436 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 MPOP05164 745 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ANXA6P08133 673 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 CTSEP14091 401 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 NME1P15531 152 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ERCC2P18074 760 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 IGFALSP35858 605 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 LIG3P49916 1009 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 NDST2P52849 883 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 PFN3P60673 137 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 COL9A2Q14055 689 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 LRRC14Q15048 493 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 PLEKHA7Q6IQ23 1121 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 PPP1R2P3Q6NXS1 205 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ERAP2Q6P179 960 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 FOXR1Q6PIV2 292 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 LRRC69Q6ZNQ3 347 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ARHGAP36Q6ZRI8 547 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 EFL1Q7Z2Z2 1120 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SRLQ86TD4 932 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 HID1Q8IV36 788 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 TSEN2Q8NCE0 465 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 BTN2A2Q8WVV5 523 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ASB12Q8WXK4 309 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 TSACCQ96A04 125 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 VOPP1Q96AW1 172 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 PEBP4Q96S96 227 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SYT11Q9BT88 431 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SNRNP25Q9BV90 132 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 DUSP23Q9BVJ7 150 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 CINPQ9BW66 212 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SLC13A1Q9BZW2 595 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 NRSN2Q9GZP1 204 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 LRRC19Q9H756 370 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ZWILCHQ9H900 591 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SP110Q9HB58 689 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 PCDH12Q9NPG4 1184 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 DONSONQ9NYP3 566 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SIRPGQ9P1W8 387 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 SPASTQ9UBP0 616 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 DKK4Q9UBT3 224 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 APOBEC3BQ9UH17 382 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 MYO6Q9UM54 1294 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 MFHAS1Q9Y4C4 1052 aa10.34□□□□□ -0.75
CTNNA1-235ENST00000522730 ADAMTS20P59510 1910 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 GOLGA6L19H0YKK7 550 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 RRP8O43159 456 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 USP12O75317 370 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 CSO75390 466 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 GCATO75600 419 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 PCCBP05166 539 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 SSR1P43307 286 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 RGRP47804 291 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 SCNN1BP51168 640 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 PPARDQ03181 441 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 ELP6Q0PNE2 266 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 CCDC173Q0VFZ6 552 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 INPP5AQ14642 412 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 IRF4Q15306 451 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 NR0B2Q15466 257 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 UGP2Q16851 508 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 SMTNL2Q2TAL5 461 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 TMEM52BQ4KMG9 183 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 TDRD12Q587J7 1177 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 E4F1Q66K89 784 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 ZCCHC8Q6NZY4 707 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 GUSBP11Q6P575 273 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 ENPP7Q6UWV6 458 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 RFX8Q6ZV50 586 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 ZSCAN30Q86W11 494 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 TP53INP2Q8IXH6 220 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 PHACTR4Q8IZ21 702 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 DCBLD1Q8N8Z6 715 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 DENND6BQ8NEG7 585 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 HSPH1Q92598 858 aa10.33□□□□□ -0.76
CTNNA1-235ENST00000522730 CPEB1Q9BZB8 566 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms