RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 PCDH19Q8TAB3 1148 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 HCAR2Q8TDS4 363 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 CASKIN2Q8WXE0 1202 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 TSACCQ96A04 125 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-204ENST00000521049 CPEB1Q9BZB8 566 aaKnown RBP16.6■□□□□ 0.25
TRAM1-204ENST00000521049 TTYH3Q9C0H2 523 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 SIRPGQ9P1W8 387 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 DNAI1Q9UI46 699 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 APPL1Q9UKG1 709 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 RP1P56715 2156 aa16.6■□□□□ 0.25
TRAM1-204ENST00000521049 LSM8O95777 96 aaKnown RBP16.59■□□□□ 0.25
TRAM1-204ENST00000521049 PNMA6AP0CW24 399 aaPredicted RBP16.59■□□□□ 0.25
TRAM1-204ENST00000521049 HGFP14210 728 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 PNLIPP16233 465 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 ITIH2P19823 946 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAM1-204ENST00000521049 IRF4Q15306 451 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 INO80DQ53TQ3 878 aaPredicted RBP16.59■□□□□ 0.25
TRAM1-204ENST00000521049 MANEAQ5SRI9 462 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 ATXN7L2Q5T6C5 722 aaPredicted RBP16.59■□□□□ 0.25
TRAM1-204ENST00000521049 RWDD4Q6NW29 188 aaKnown RBP16.59■□□□□ 0.25
TRAM1-204ENST00000521049 OGFOD3Q6PK18 319 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 ENPP7Q6UWV6 458 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 ZSCAN1Q8NBB4 408 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 GPR156Q8NFN8 814 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 ATL2Q8NHH9 583 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 GDAP1L1Q96MZ0 367 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 APOOQ9BUR5 198 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 PISDQ9UG56 409 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 LOXL2Q9Y4K0 774 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 HECTD1Q9ULT8 2610 aa16.59■□□□□ 0.25
TRAM1-204ENST00000521049 NAV2Q8IVL1 2488 aa16.58■□□□□ 0.25
TRAM1-204ENST00000521049 GOLGA8SH3BPF8 625 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 BUB1O43683 1085 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 RAMP2O60895 175 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 TNFP01375 233 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 GLB1P16278 677 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 SRP54P61011 504 aaKnown RBP16.58■□□□□ 0.24
TRAM1-204ENST00000521049 ATP11AP98196 1134 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 ELP6Q0PNE2 266 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 SRSF6Q13247 344 aaKnown RBP16.58■□□□□ 0.24
TRAM1-204ENST00000521049 NFATC4Q14934 902 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 AGERQ15109 404 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 TBR1Q16650 682 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 WSCD2Q2TBF2 565 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 C2CD6Q53TS8 623 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 LRRC73Q5JTD7 316 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 DPY19L2P1Q6NXN4 242 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 RD3Q7Z3Z2 195 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAM1-204ENST00000521049 WRAP53Q9BUR4 548 aaKnown RBP16.58■□□□□ 0.24
TRAM1-204ENST00000521049 TRIM4Q9C037 500 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 B3GNT4Q9C0J1 378 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 PCDHB11Q9Y5F2 797 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 DGKBQ9Y6T7 804 aa16.58■□□□□ 0.24
TRAM1-204ENST00000521049 A0A1W2PQC6 194 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 TMCC1O94876 653 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 LRIG2O94898 1065 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 IGSF6O95976 241 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 FAM87AP0C7U9 286 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
TRAM1-204ENST00000521049 INPP5AQ14642 412 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 COLEC12Q5KU26 742 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 FAM72AQ5TYM5 149 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 FAM72DQ6L9T8 149 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 FAM72BQ86X60 149 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 DTX1Q86Y01 620 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 CCNJLQ8IV13 435 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 TBC1D31Q96DN5 1066 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 CMKLR1Q99788 373 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 KLQ9UEF7 1012 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 KIF26BQ2KJY2 2108 aa16.57■□□□□ 0.24
TRAM1-204ENST00000521049 PRAMEF33A0A0G2JMD5 474 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 PRAMEF10O60809 474 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 PLEKP08567 350 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-204ENST00000521049 XPAP23025 273 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-204ENST00000521049 CD82P27701 267 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 NFKB2Q00653 900 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 CCDC14Q49A88 953 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 CERCAMQ5T4B2 595 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 TAF3Q5VWG9 929 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 ZNF574Q6ZN55 896 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-204ENST00000521049 EMC1Q8N766 993 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 Q8N9G6 341 aaPredicted RBP16.56■□□□□ 0.24
TRAM1-204ENST00000521049 CPA5Q8WXQ8 436 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 USP7Q93009 1102 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 WDR92Q96MX6 357 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 NEU3Q9UQ49 428 aa16.56■□□□□ 0.24
TRAM1-204ENST00000521049 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
TRAM1-204ENST00000521049 ITIH1P19827 911 aa16.55■□□□□ 0.24
TRAM1-204ENST00000521049 SDC4P31431 198 aa16.55■□□□□ 0.24
TRAM1-204ENST00000521049 RHOAP61586 193 aa16.55■□□□□ 0.24
TRAM1-204ENST00000521049 MTM1Q13496 603 aa16.55■□□□□ 0.24
TRAM1-204ENST00000521049 GRM3Q14832 879 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms