RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 EDEM1Q92611 657 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 RAB7BQ96AH8 199 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ARHGEF26Q96DR7 871 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 PPP1R13BQ96KQ4 1090 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 BTN2A3PQ96KV6 586 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 NOX5Q96PH1 765 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 TEFMQ96QE5 360 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 TAAR9Q96RI9 348 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 LRRC61Q9BV99 259 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 DDA1Q9BW61 102 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 C1QTNF7Q9BXJ2 289 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SLC29A3Q9BZD2 475 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ZNF768Q9H5H4 540 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 NEUROD4Q9HD90 331 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 DONSONQ9NYP3 566 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 FEZ2Q9UHY8 353 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 GGT7Q9UJ14 662 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ZFR2Q9UPR6 939 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 HS3ST2Q9Y278 367 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 PCDHGA11Q9Y5H2 935 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SRPRBQ9Y5M8 271 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 MORC2Q9Y6X9 1032 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 DCHS2Q6V1P9 2916 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 GOLGA6L7A0A1B0GV03 622 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 A0A1W2PQM1 296 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 WIPF3A6NGB9 483 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SOWAHDA6NJG2 315 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 YJEFN3A6XGL0 299 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 TMEM110-MUSTN1A8MSY1 372 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 E7ENQ6 273 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 F5H5T6 163 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 FAM229AH3BQW9 127 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 MAPK13O15264 365 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SART1O43290 800 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 TSPAN6O43657 245 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 NUDT21O43809 227 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 GCATO75600 419 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 FBXO21O94952 628 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CPNE6O95741 557 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 PAK4O96013 591 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 HLA-DRAP01903 254 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 ALBP02768 609 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 LTFP02788 710 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 H2AFB1P0C5Y9 115 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 H2AFB2P0C5Z0 115 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SLC2A3P11169 496 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 ADRB3P13945 408 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CTSEP14091 401 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 NID1P14543 1247 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 LIFP15018 202 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 VAV1P15498 845 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 TSHRP16473 764 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CD58P19256 250 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 GNLYP22749 145 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 MAP4P27816 1152 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CHRNA3P32297 505 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 UGT1A3P35503 534 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 NOP2P46087 812 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 UQCRFS1P47985 274 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 PEX5P50542 639 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 MLLT10P55197 1068 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 DAOAP59103 153 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 PFN3P60673 137 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KRT83P78385 493 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CCL7P80098 99 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 PPARDQ03181 441 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 DPYDQ12882 1025 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 EIF2B5Q13144 721 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 TRA2AQ13595 282 aaKnown RBP eCLIP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 DLG2Q15700 870 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KNOP1Q1ED39 458 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SKOR2Q2VWA4 1001 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 MAP9Q49MG5 647 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 FAXCQ5TGI0 409 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 C1QL3Q5VWW1 255 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SEL1L3Q68CR1 1132 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 NADSYN1Q6IA69 706 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SPOPLQ6IQ16 392 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 MMS22LQ6ZRQ5 1243 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 BEND5Q7L4P6 421 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SPRED1Q7Z699 444 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 PIM3Q86V86 326 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CCDC13Q8IYE1 715 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 CACNA2D3Q8IZS8 1091 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 APCDD1Q8J025 514 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KYQ8NBH2 561 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 SLC4A11Q8NBS3 891 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 UBXN4Q92575 508 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KLK6Q92876 244 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 INTS4Q96HW7 963 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 FCRL2Q96LA5 508 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 GBP4Q96PP9 640 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 DPYSL5Q9BPU6 564 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 ZPBPQ9BS86 351 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 C2orf49Q9BVC5 232 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 TRIT1Q9H3H1 467 aaKnown RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 GPN2Q9H9Y4 310 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-207ENST00000520168 MAGEF1Q9HAY2 307 aa4.97□□□□□ -1.61
SDCBP-207ENST00000520168 KBTBD4Q9NVX7 518 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms