RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 OR6C3Q9NZP0 311 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 MAGEC2Q9UBF1 373 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 SLC9A2Q9UBY0 812 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 SLC45A1Q9Y2W3 748 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 MSRB2Q9Y3D2 182 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 GPR45Q9Y5Y3 372 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 CDY1Q9Y6F8 540 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 ZFP37Q9Y6Q3 630 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 COL1A2P08123 1366 aa-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 RP1L1Q8IWN7 2480 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.17-201ENST00000517256 COL5A1P20908 1838 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 IGHV3OR16-10A0A075B7F0 116 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 A0A087WW49 117 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ARHGAP10A1A4S6 786 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ZNF840PA6NDX5 716 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CCDC154A6NI56 674 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 J3QKU1 62 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 AGPSO00116 658 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CHL1O00533 1208 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 HSPB6O14558 160 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 MID1O15344 667 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CNTN5O94779 1100 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 SLCO2B1O94956 709 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 TNFRSF6BO95407 300 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 THY1P04216 161 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 RFPL3SP0C7P2 107 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ODC1P11926 461 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 FOLR2P14207 255 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 HNRNPA2B1P22626 353 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 MMP8P22894 467 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 RBL1P28749 1068 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 OAS2P29728 719 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CAPGP40121 348 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 DCTP40126 519 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 SLC11A2P49281 568 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 HDAC4P56524 1084 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 IGLV3-21P80748 117 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 HDLBPQ00341 1268 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 MECOMQ03112 1051 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ARID5AQ03989 594 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 RUNX3Q13761 415 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 C16orf72Q14CZ0 275 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 FASTKD3Q14CZ7 662 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 OASLQ15646 514 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CCDC96Q2M329 555 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 TTC31Q49AM3 519 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 DCAF6Q58WW2 860 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 TECRLQ5HYJ1 363 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 MARC1Q5VT66 337 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ERAP2Q6P179 960 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 KRT27Q7Z3Y8 459 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 KIAA0907Q7Z7F0 614 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 C11orf96Q7Z7L8 435 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ZC3HC1Q86WB0 502 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 FAM90A1Q86YD7 464 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CCDC105Q8IYK2 499 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 TPRX1Q8N7U7 411 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 CEP70Q8NHQ1 597 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 TMEM163Q8TC26 289 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ATP8B4Q8TF62 1192 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 FCAMRQ8WWV6 532 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 PDLIM5Q96HC4 596 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 USP28Q96RU2 1077 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 KXD1Q9BQD3 176 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 PSD2Q9BQI7 771 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 MESP1Q9BRJ9 268 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 PINK1Q9BXM7 581 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 RSPO3Q9BXY4 272 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 OSBPL5Q9H0X9 879 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 ECHDC1Q9NTX5 307 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 LMBRD1Q9NUN5 540 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 PADI1Q9ULC6 663 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 SLC27A6Q9Y2P4 619 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 RAI2Q9Y5P3 530 aa-0.12□□□□□ -2.43
SNORA40.17-201ENST00000517256 PTCH1Q13635 1447 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 PRAG1Q86YV5 1406 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 FER1L4A9Z1Z3 1794 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 A0A087WZ62 844 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 TRBV5-7A0A0A0MS05 114 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 A0A0U1RQK1 487 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 C17orf102A2RUQ5 167 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 H7C4K7 107 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 PHF1O43189 567 aaPredicted RBP-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 MAGEC1O60732 1142 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 ITGA2P17301 1181 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 POU3F2P20265 443 aaPredicted RBP-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 STX2P32856 288 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 PMELP40967 661 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 UBA7P41226 1012 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 GSTM5P46439 218 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 PTDSS1P48651 473 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 MMP14P50281 582 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 CRISP1P54107 249 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 B3GALT5-AS1P59052 145 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 EEF1A1P68104 462 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 TIAL1Q01085 375 aaKnown RBP eCLIP-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 GALNT2Q10471 571 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 DRP2Q13474 957 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 CAMK1Q14012 370 aa-0.13□□□□□ -2.43
SNORA40.17-201ENST00000517256 PNLIPRP3Q17RR3 467 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms