RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TREX1Q9NSU2 369 aa7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 NSMCE4AQ9NXX6 385 aa7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CLDND1Q9NY35 253 aa7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CLEC1BQ9P126 229 aa7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 EVLQ9UI08 416 aaPredicted RBP7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PCDHGC4Q9Y5F7 938 aa7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CDH23Q9H251 3354 aa7.7□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 A0A1W2PPM1 405 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MROH6A6NGR9 719 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 FAM47DPA6NHR8 397 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ANKRD66B4E2M5 251 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TRIM49D1C9J1S8 452 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 LDB2O43679 373 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SOCS5O75159 536 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TBX10O75333 385 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 FAM155BO75949 473 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 VAPBO95292 243 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CRTAMO95727 393 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GSRP00390 522 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ASLP04424 464 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ARSAP15289 507 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CHN1P15882 459 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CREB1P16220 341 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 KRT4P19013 534 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 FCARP24071 287 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 NNMTP40261 264 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GRIA4P48058 902 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 EPHB1P54762 984 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CSE1LP55060 971 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GNGT1P63211 74 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GUCY1A3Q02108 690 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PPARDQ03181 441 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DLX2Q07687 328 aaPredicted RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 BCL2L1Q07817 233 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DNAJC3Q13217 504 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MSLNQ13421 630 aaPredicted RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 THOC5Q13769 683 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SMAD1Q15797 465 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CNGA3Q16281 694 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GEN1Q17RS7 908 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CTC1Q2NKJ3 1217 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ACCSLQ4AC99 568 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DGKKQ5KSL6 1271 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ARMC12Q5T9G4 340 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TEDDM1Q5T9Z0 273 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GRTP1Q5TC63 336 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TANGO2Q6ICL3 276 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 C22orf39Q6P5X5 142 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 VITQ6UXI7 678 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 STRA8Q7Z7C7 330 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ADIPOR2Q86V24 386 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MFSD6LQ8IWD5 586 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 C4orf33Q8N1A6 199 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CPA6Q8N4T0 437 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PCDH20Q8N6Y1 951 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PAF1Q8N7H5 531 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 LPCAT1Q8NF37 534 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 OR2AP1Q8NGE2 309 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GABPB2Q8TAK5 448 aaPredicted RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MDM1Q8TC05 714 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 BLOC1S5Q8TDH9 187 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PEX13Q92968 403 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ALKBH8Q96BT7 664 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ASIC4Q96FT7 647 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ZFYVE19Q96K21 471 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MYADMQ96S97 322 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 FAM83CQ9BQN1 747 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CEP44Q9C0F1 390 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 S1PR5Q9H228 398 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TNKS2Q9H2K2 1166 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 EBF3Q9H4W6 596 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ATP13A3Q9H7F0 1226 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SSU72Q9NP77 194 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 IARS2Q9NSE4 1012 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 INTS9Q9NV88 658 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PSD3Q9NYI0 1048 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 NKIRAS1Q9NYS0 192 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 IL1RAPL1Q9NZN1 696 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 HACD3Q9P035 362 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC17A6Q9P2U8 582 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC2A6Q9UGQ3 507 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 FBXO10Q9UK96 956 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 RIMKLBQ9ULI2 386 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SMG5Q9UPR3 1016 aaKnown RBP7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC8A2Q9UPR5 921 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ERVW-1Q9UQF0 538 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 COL4A3Q01955 1670 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 REV3LO60673 3130 aa7.69□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SCN8AQ9UQD0 1980 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 A0A1W2PPC1 479 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 C2orf81A6NN90 581 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GOLGA8TH3BQL2 631 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GOLGA8RI6L899 631 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TRIM24O15164 1050 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 PRPF4O43172 522 aaKnown RBP eCLIP7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC7A4O43246 635 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TIMM44O43615 452 aa7.68□□□□□ -1.18
SCARNA20.1-201ENST00000516009 BNIP3LO60238 219 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms