RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 HTR1BP28222 390 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 ADRA1BP35368 520 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 MTIF2P46199 727 aaKnown RBP15.93■□□□□ 0.14
LMNA-223ENST00000515459 ATP11AP98196 1134 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 LRRC14Q15048 493 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 TCEA2Q15560 299 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 ALG11Q2TAA5 492 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 MANEALQ5VSG8 457 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 ATG14Q6ZNE5 492 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 RD3Q7Z3Z2 195 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 NLRP14Q86W24 1093 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 TSACCQ96A04 125 aaPredicted RBP15.93■□□□□ 0.14
LMNA-223ENST00000515459 TTYH3Q9C0H2 523 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 LRRN3Q9H3W5 708 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 DKK3Q9UBP4 350 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 PISDQ9UG56 409 aa15.93■□□□□ 0.14
LMNA-223ENST00000515459 SPTA1P02549 2419 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 ZSCAN5CA6NGD5 496 aaPredicted RBP15.92■□□□□ 0.14
LMNA-223ENST00000515459 TERTO14746 1132 aaKnown RBP15.92■□□□□ 0.14
LMNA-223ENST00000515459 BUB1O43683 1085 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 KDELR3O43731 214 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 LSM8O95777 96 aaKnown RBP15.92■□□□□ 0.14
LMNA-223ENST00000515459 SFTPCP11686 197 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 ITIH2P19823 946 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 ELP6Q0PNE2 266 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 SRSF6Q13247 344 aaKnown RBP15.92■□□□□ 0.14
LMNA-223ENST00000515459 MANEAQ5SRI9 462 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 TAF3Q5VWG9 929 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 ENPP7Q6UWV6 458 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 IRF2BP1Q8IU81 584 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 EMC1Q8N766 993 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 LOXL2Q9Y4K0 774 aa15.92■□□□□ 0.14
LMNA-223ENST00000515459 UNC13CQ8NB66 2214 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 FAM72CH0Y354 149 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 TMCC1O94876 653 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 LRIG2O94898 1065 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 IGSF6O95976 241 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 TIMP2P16035 220 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 ITGB6P18564 788 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 XPAP23025 273 aaPredicted RBP15.91■□□□□ 0.14
LMNA-223ENST00000515459 SUOXP51687 545 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 SRP54P61011 504 aaKnown RBP15.91■□□□□ 0.14
LMNA-223ENST00000515459 NFKB2Q00653 900 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 RAPGEF1Q13905 1077 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 NFATC4Q14934 902 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 CDO1Q16878 200 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 TMEM52BQ4KMG9 183 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 FAM72AQ5TYM5 149 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 FAM72DQ6L9T8 149 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 FAM72BQ86X60 149 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 ZNF354CQ86Y25 554 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 ZSCAN1Q8NBB4 408 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 ATL2Q8NHH9 583 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 CASKIN2Q8WXE0 1202 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 CPA5Q8WXQ8 436 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 TMEM159Q96B96 161 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 SEMA3CQ99985 751 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 APOOQ9BUR5 198 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 METTL5Q9NRN9 209 aaKnown RBP15.91■□□□□ 0.14
LMNA-223ENST00000515459 KLQ9UEF7 1012 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 COQ6Q9Y2Z9 468 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 MFHAS1Q9Y4C4 1052 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 AHCTF1Q8WYP5 2266 aa15.91■□□□□ 0.14
LMNA-223ENST00000515459 ANKRD36A6QL64 1941 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 PRAMEF33A0A0G2JMD5 474 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 SUV39H1O43463 412 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 PRAMEF10O60809 474 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 FAM87AP0C7U9 286 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 ITIH1P19827 911 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 SDC4P31431 198 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 RHOAP61586 193 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 INPP5AQ14642 412 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 MAN2A1Q16706 1144 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 C15orf59Q2T9L4 293 aaPredicted RBP15.9■□□□□ 0.14
LMNA-223ENST00000515459 WSCD2Q2TBF2 565 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 RAB6CQ53S08 254 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 CCNJLQ8IV13 435 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 Q8N9G6 341 aaPredicted RBP15.9■□□□□ 0.14
LMNA-223ENST00000515459 GPR156Q8NFN8 814 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 TBC1D31Q96DN5 1066 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 CMKLR1Q99788 373 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 RAB6CQ9H0N0 254 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 APPL1Q9UKG1 709 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 NEU3Q9UQ49 428 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 PCDHB11Q9Y5F2 797 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 PCDHGA4Q9Y5G9 962 aa15.9■□□□□ 0.14
LMNA-223ENST00000515459 TNFP01375 233 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 PLEKP08567 350 aaPredicted RBP15.89■□□□□ 0.13
LMNA-223ENST00000515459 PNLIPP16233 465 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 GLB1P16278 677 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 NOMO3P69849 1222 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
LMNA-223ENST00000515459 TPD52L1Q16890 204 aaPredicted RBP15.89■□□□□ 0.13
LMNA-223ENST00000515459 CCDC14Q49A88 953 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 INO80DQ53TQ3 878 aaPredicted RBP15.89■□□□□ 0.13
LMNA-223ENST00000515459 NOP9Q86U38 636 aaKnown RBP15.89■□□□□ 0.13
LMNA-223ENST00000515459 VASH2Q86V25 355 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 HCAR2Q8TDS4 363 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 RXFP2Q8WXD0 754 aa15.89■□□□□ 0.13
LMNA-223ENST00000515459 WDR92Q96MX6 357 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms