RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 MLNP12872 115 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 C5AR1P21730 350 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 WASP42768 502 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 WNT3AP56704 352 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 RPS14P62263 151 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 SATB1Q01826 763 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 CAV1Q03135 178 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 CDK18Q07002 472 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 CST6Q15828 149 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 NAPEPLDQ6IQ20 393 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 USP30Q70CQ3 517 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PPIL6Q8IXY8 311 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 RYBPQ8N488 228 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 CAMKK1Q8N5S9 505 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 NAT8LQ8N9F0 302 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 EIF1ADQ8N9N8 165 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 LRRN4CLQ8ND94 238 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PRSS33Q8NF86 280 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 CPT1BQ92523 772 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 MKRN2Q9H000 416 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 SARDHQ9UL12 918 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 PHTF1Q9UMS5 762 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.48
PDLIM5-220ENST00000514830 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 SCN8AQ9UQD0 1980 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 TTC24A2A3L6 582 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 STK25O00506 426 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 SLC7A4O43246 635 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 BNIP3LO60238 219 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PIGNO95427 931 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PDGFBP01127 241 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 FGF1P05230 155 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 UGT2B4P06133 528 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 APRTP07741 180 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 RPL21P46778 160 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 GRIA4P48058 902 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 CCR3P51677 355 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 POLR2LP62875 67 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 BASP1P80723 227 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 SARNPP82979 210 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 MTAPQ13126 283 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 ARMC12Q5T9G4 340 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 HIBCHQ6NVY1 386 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 RASSF3Q86WH2 238 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 TMPRSS6Q8IU80 811 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 CAMK1DQ8IU85 385 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 FLCNQ8NFG4 579 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 OR6K2Q8NGY2 324 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PIH1D2Q8WWB5 315 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 RAB7BQ96AH8 199 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 MRGPRX1Q96LB2 322 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 LYSMD1Q96S90 227 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 C19orf43Q9BQ61 176 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PHACTR1Q9C0D0 580 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 ZNF106Q9H2Y7 1883 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PABPC3Q9H361 631 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PRMT8Q9NR22 394 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 GRHL1Q9NZI5 618 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 EBF1Q9UH73 591 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 DMGDHQ9UI17 866 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 PCDHGC4Q9Y5F7 938 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 MYLKQ15746 1914 aa12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 ZFHX2Q9C0A1 2572 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-220ENST00000514830 LRRK1Q38SD2 2015 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 CCDC163A0A0D9SF12 145 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 ANKRD66B4E2M5 251 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 E7EVH7 732 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 PI15O43692 258 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 AP1G1O43747 822 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 PMPCBO75439 489 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 IL1BP01584 269 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 DCNP07585 359 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 GABRG2P18507 467 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 NDUFV2P19404 249 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 NFKBIAP25963 317 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 TNFRSF8P28908 595 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 AVPR2P30518 371 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 GKP32189 559 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 SLC8A1P32418 973 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 MAGEA3P43357 314 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 VPS41P49754 854 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 CALCOCO2Q13137 446 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 MSLNQ13421 630 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 CUL1Q13616 776 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 SLC1A5Q15758 541 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms