RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 HSFY1Q96LI6 401 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
VCAN-210ENST00000513960 CPNE1Q99829 537 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 CORO1BQ9BR76 489 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 LRRC4Q9HBW1 653 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 MAN1A2O60476 641 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 CRCPO75575 148 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 LMO2P25791 158 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 MAGEA6P43360 314 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 HARS2P49590 506 aaKnown RBP9.73□□□□□ -0.85
VCAN-210ENST00000513960 PLIN5Q00G26 463 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 SLC12A1Q13621 1099 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 DPYSQ14117 519 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 ZBTB6Q15916 424 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 ZBED5Q49AG3 693 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 GRTP1Q5TC63 336 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 CHSY3Q70JA7 882 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 GPR180Q86V85 440 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 KCNMB4Q86W47 210 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 KIAA2013Q8IYS2 634 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 CRYBG2Q8N1P7 616 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 CCDC185Q8N715 623 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 ELMO2Q96JJ3 720 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 RPL10LQ96L21 214 aaKnown RBP9.73□□□□□ -0.85
VCAN-210ENST00000513960 TCF12Q99081 682 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 TINF2Q9BSI4 451 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 PLAC1Q9HBJ0 212 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 VPS45Q9NRW7 570 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 VANGL2Q9ULK5 521 aa9.73□□□□□ -0.85
VCAN-210ENST00000513960 TMEM221A6NGB7 291 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 A8MU76 341 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CCNA2P20248 432 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CD247P20963 164 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 ZBTB17Q13105 803 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 PMS2P3Q13401 168 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CAPRIN1Q14444 709 aaKnown RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 INPP5AQ14642 412 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 TGFBIQ15582 683 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CERCAMQ5T4B2 595 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 IQSEC1Q6DN90 963 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 STRADAQ7RTN6 431 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 DEFB106AQ8N104 65 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 TNIP2Q8NFZ5 429 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 VPS39Q96JC1 886 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 QKIQ96PU8 341 aaKnown RBP eCLIP9.72□□□□□ -0.85
VCAN-210ENST00000513960 PPP1R10Q96QC0 940 aaKnown RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 ADAMTS10Q9H324 1103 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 MRPL40Q9NQ50 206 aaKnown RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 DTLQ9NZJ0 730 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 VPS51Q9UID3 782 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 ATP11BQ9Y2G3 1177 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 NRCAMQ92823 1304 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 A0A0A0MRY4 1105 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 GABBR2O75899 941 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 DARSP14868 501 aaKnown RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 MAGP20916 626 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 PSMA4P25789 261 aaKnown RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 SCNN1AP37088 669 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 PGS1Q32NB8 556 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SV2CQ496J9 727 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 METTL21CQ5VZV1 264 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 FAM219BQ5XKK7 198 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 DCDC5Q6ZRR9 648 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 ARMCX6Q7L4S7 300 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 GPR142Q7Z601 462 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 DDIASQ8IXT1 998 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SPATA13Q96N96 652 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 MED10Q9BTT4 135 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 HIPK3Q9H422 1215 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 LRRC40Q9H9A6 602 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SPAG4Q9NPE6 437 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 MKS1Q9NXB0 559 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 NME7Q9Y5B8 376 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 FADS3Q9Y5Q0 445 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 PRSS51A0A1B0GVH4 220 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 HACD1B0YJ81 288 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CNOT3O75175 753 aaKnown RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 ZNF26P17031 533 aaPredicted RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 MATKP42679 507 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 GSTM4Q03013 218 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 PRKCQQ04759 706 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CSHL1Q14406 222 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 RAB39AQ14964 217 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 PCBP1Q15365 356 aaKnown RBP eCLIP9.72□□□□□ -0.85
VCAN-210ENST00000513960 MAPRE2Q15555 327 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 ZNF829Q3KNS6 432 aaPredicted RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 CLEC4FQ8N1N0 589 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 DHRSXQ8N5I4 330 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SLC15A4Q8N697 577 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 FAM110BQ8TC76 370 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 DNAJB3Q8WWF6 145 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 CENPIQ92674 756 aaPredicted RBP9.72□□□□□ -0.85
VCAN-210ENST00000513960 FANCEQ9HB96 536 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 ATAD3AQ9NVI7 634 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SPATA7Q9P0W8 599 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 STAP1Q9ULZ2 295 aa9.72□□□□□ -0.85
VCAN-210ENST00000513960 SCN1AP35498 2009 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms