RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MID1O15344 667 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF217O75362 1048 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GCATO75600 419 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PIGNO95427 931 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GAS8O95995 478 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 IFNB1P01574 187 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 UGT2B4P06133 528 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GOLGA6DP0CG33 693 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 TDGF1P13385 188 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 NFKB1P19838 968 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 NFKBIAP25963 317 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ITGB7P26010 798 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PSMB4P28070 264 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GKP32189 559 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 CD68P34810 354 aaPredicted RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 COILP38432 576 aaPredicted RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 KCNJ1P48048 391 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 NRLP54845 237 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 RPS14P62263 151 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 BCL2L1Q07817 233 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC15Q0P6D6 951 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 WHAMMP3Q1A5X7 153 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF528Q3MIS6 628 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF805Q5CZA5 627 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 CFAP58Q5T655 872 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 BRAT1Q6PJG6 821 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 KIAA1324Q6UXG2 1013 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 C4orf22Q6V702 233 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GDPD4Q6W3E5 623 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ARHGEF18Q6ZSZ5 1173 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GSTA5Q7RTV2 222 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF572Q7Z3I7 529 aaPredicted RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ATL2Q8NHH9 583 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ARRDC2Q8TBH0 407 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC110Q8TBZ0 833 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 SLCO2A1Q92959 643 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 VOPP1Q96AW1 172 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 IMP4Q96G21 291 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 FCRL5Q96RD9 977 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 LRFN3Q9BTN0 628 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 DDX47Q9H0S4 455 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC6A17Q9H1V8 727 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PABPC3Q9H361 631 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 SUV39H2Q9H5I1 410 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 C10orf88Q9H8K7 445 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 NOD2Q9HC29 1040 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PCDH9Q9HC56 1237 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 DYRK4Q9NR20 520 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 VPS45Q9NRW7 570 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GOLGA6AQ9NYA3 693 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 USP36Q9P275 1121 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PAK5Q9P286 719 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 DKK3Q9UBP4 350 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PCYOX1Q9UHG3 505 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 SARDHQ9UL12 918 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 FZD4Q9ULV1 537 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 AAR2Q9Y312 384 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 MRFAP1Q9Y605 127 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 A0A1W2PP55 124 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TSPAN11A1L157 253 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TRAFD1O14545 582 aaPredicted RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 AXIN1O15169 862 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC7A4O43246 635 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 HTRA2O43464 458 aaPredicted RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 GJB3O75712 270 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ANXA9O76027 345 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ECEL1O95672 775 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 IGLV3-19P01714 112 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 MMP2P08253 660 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC8A1P32418 973 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 DRD3P35462 400 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 FDFT1P37268 417 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 CD86P42081 329 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 NEK3P51956 506 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 METAP1P53582 386 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 GEMP55040 296 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 POLR2LP62875 67 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 SKOR1P84550 965 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 CSTF1Q05048 431 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 NIPAL4Q0D2K0 466 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TRAF2Q12933 501 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 MPP3Q13368 585 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 PRPSAP1Q14558 356 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ANGPT1Q15389 498 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 DNTTIP2Q5QJE6 756 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ARMC12Q5T9G4 340 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TTC27Q6P3X3 843 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TSSK4Q6SA08 328 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ERN2Q76MJ5 926 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 PARS2Q7L3T8 475 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 WDR5BQ86VZ2 330 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 LONP2Q86WA8 852 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 CAMK1DQ8IU85 385 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 KLHDC8BQ8IXV7 354 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 MAML2Q8IZL2 1156 aaPredicted RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 AADATQ8N5Z0 425 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 PAF1Q8N7H5 531 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 SPATA4Q8NEY3 305 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms