RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ECHDC3Q96DC8 303 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 TBL1YQ9BQ87 522 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 FICDQ9BVA6 458 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 FSD1LQ9BXM9 530 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 RSPH9Q9H1X1 276 aaPredicted RBP12.64□□□□□ -0.39
PDPN-210ENST00000513143 SUV39H2Q9H5I1 410 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 FBRSQ9HAH7 460 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 ARNT2Q9HBZ2 717 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
PDPN-210ENST00000513143 CTIFO43310 598 aaKnown RBP12.63□□□□□ -0.39
PDPN-210ENST00000513143 ATG13O75143 517 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 USP12O75317 370 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 PGLSO95336 258 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 NDST3O95803 873 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 UGT2B4P06133 528 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 PDHA1P08559 390 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 TNFRSF8P28908 595 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 GRIA1P42261 906 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 COPAP53621 1224 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 PLTPP55058 493 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
PDPN-210ENST00000513143 SARNPP82979 210 aaKnown RBP12.63□□□□□ -0.39
PDPN-210ENST00000513143 OLIG2Q13516 323 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 GAS6Q14393 721 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 NAA30Q147X3 362 aaPredicted RBP12.63□□□□□ -0.39
PDPN-210ENST00000513143 SLC1A5Q15758 541 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 CRY1Q16526 586 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 ZNF805Q5CZA5 627 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 ARMC12Q5T9G4 340 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 DENND5AQ6IQ26 1287 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 WDR93Q6P2C0 686 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 LRRC8BQ6P9F7 803 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 TMEM92Q6UXU6 159 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 TRIM67Q6ZTA4 783 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 PIP4K2CQ8TBX8 421 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 FBXO25Q8TCJ0 367 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 GRIN3AQ8TCU5 1115 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 IFT81Q8WYA0 676 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 KLHL32Q96NJ5 620 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 APOL2Q9BQE5 337 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 ADGRE3Q9BY15 652 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 FRMD8Q9BZ67 464 aaPredicted RBP12.63□□□□□ -0.39
PDPN-210ENST00000513143 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 CASS4Q9NQ75 786 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 DKK3Q9UBP4 350 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 SARDHQ9UL12 918 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 RPL26L1Q9UNX3 145 aaKnown RBP12.63□□□□□ -0.39
PDPN-210ENST00000513143 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 SIT1Q9Y3P8 196 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
PDPN-210ENST00000513143 A0A1W2PQ67 120 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 TSPAN11A1L157 253 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 AP3B1O00203 1094 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 RNASEH1O60930 286 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 ATXN1LP0C7T5 689 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 MLNP12872 115 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 ALADP13716 330 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 ECHS1P30084 290 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 TNNT3P45378 269 aaPredicted RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 SATB1Q01826 763 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 CBLBQ13191 982 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 SIRPB2Q5JXA9 342 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 FAM46CQ5VWP2 391 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 CAND1Q86VP6 1230 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 ZSWIM9Q86XI8 627 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 MMAAQ8IVH4 418 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 OR52K1Q8NGK4 314 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 PDCD6IPQ8WUM4 868 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 PIH1D2Q8WWB5 315 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 SERPINB12Q96P63 405 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 PARD6BQ9BYG5 372 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 XAB2Q9HCS7 855 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 BDP1A6H8Y1 2624 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 MYLKQ15746 1914 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 ANKRD66B4E2M5 251 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 C1QTNF3-AMACRE9PGA6 284 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 IL1BP01584 269 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 FGF1P05230 155 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 TUBBP07437 444 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 ITGB7P26010 798 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 MAGEA3P43357 314 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 CHRNA4P43681 627 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 GRIA4P48058 902 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 DGKEP52429 567 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 RPS14P62263 151 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 VSNL1P62760 191 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
PDPN-210ENST00000513143 CDH17Q12864 832 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 GALNT3Q14435 633 aa12.62□□□□□ -0.39
PDPN-210ENST00000513143 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDPN-210ENST00000513143 ELF2Q15723 593 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms