RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MARCH4Q9P2E8 410 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 KCNK6Q9Y257 313 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 TIMM22Q9Y584 194 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 NUMBLQ9Y6R0 609 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 PMF1-BGLAPU3KQ54 211 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 TECPR2O15040 1411 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 ASTN2O75129 1339 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 WIPF3A6NGB9 483 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 CASC3O15234 703 aaKnown RBP6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 CSTAP01040 98 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 IL1BP01584 269 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 FHP07954 510 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 THBS1P07996 1170 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 ERCC2P18074 760 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 SERPINB6P35237 376 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 ARSFP54793 590 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 SESN2P58004 480 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 NRN1LQ496H8 165 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 LIN9Q5TKA1 542 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 C17orf47Q8NEP4 570 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 TSPAN17Q96FV3 270 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 PGM2Q96G03 612 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 CORO1BQ9BR76 489 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 ZNF577Q9BSK1 485 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 RC3H2Q9HBD1 1191 aaKnown RBP6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 RAB20Q9NX57 234 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 DNPEPQ9ULA0 475 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 RNF24Q9Y225 148 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 CPS1P31327 1500 aa6.37□□□□□ -1.39
TRAPPC11-209ENST00000512476 PARD3Q8TEW0 1356 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CYP3A7-CYP3A51PA0A087WV96 503 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 A0A0A0MRY4 1105 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 BTBD17A6NE02 478 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRSS29PA6NIE9 313 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 FAM90A27PA6NNH2 459 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 NDUFS8O00217 210 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 EFSO43281 561 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 DYRK3O43781 588 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 HEXIM1O94992 359 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRSS23O95084 383 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRAMEF1O95521 474 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CXCL14O95715 111 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GNAT1P11488 350 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CYP3A7P24462 503 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLC5A2P31639 672 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PXNP49023 591 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SMSP52788 366 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 TAS2R40P59535 323 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 DSTNP60981 165 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ADAM17P78536 824 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 TLE1Q04724 770 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SNTB2Q13425 540 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 LARS2Q15031 903 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 HERC3Q15034 1050 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 STK38Q15208 465 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPR19Q15760 415 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLC5A9Q2M3M2 681 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 TRIM71Q2Q1W2 868 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 BCL7AQ4VC05 210 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ARL6IP4Q66PJ3 421 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ERICH5Q6P6B1 374 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 FAM90A1Q86YD7 464 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ELP5Q8TE02 316 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CDKL2Q92772 493 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ELMOD3Q96FG2 381 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 C5orf30Q96GV9 206 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PARK7Q99497 189 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PKP2Q99959 881 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CLSTN3Q9BQT9 956 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 WDR83Q9BRX9 315 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 IKZF4Q9H2S9 585 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 USP29Q9HBJ7 922 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 AGPAT5Q9NUQ2 364 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 LMCD1Q9NZU5 365 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 AP4B1Q9Y6B7 739 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PLEKHH1Q9ULM0 1364 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 LOC100506127A0A0U1RQW1 187 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 TARM1B6A8C7 271 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 SLC33A1O00400 549 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ST8SIA5O15466 376 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 CER1O95813 267 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GNAI2P04899 355 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GALTP07902 379 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 NF2P35240 595 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 EFNA5P52803 228 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 NKX3-2P78367 333 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PPIDQ08752 370 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 ASPHQ12797 758 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPS2Q13227 327 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 Q3ZCU0 254 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 NADK2Q4G0N4 442 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 EFHC1Q5JVL4 640 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 RTP2Q5QGT7 225 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 PRAMEF20Q5VT98 475 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 KANK2Q63ZY3 851 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 FCRL6Q6DN72 434 aa6.36□□□□□ -1.39
TRAPPC11-209ENST00000512476 GPAT2Q6NUI2 795 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms