RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 MFAP3P55082 362 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 EIF3BP55884 814 aaKnown RBP6.34□□□□□ -1.39
CHD1-208ENST00000512392 ARHGEF7Q14155 803 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 ARHGAP19Q14CB8 494 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 SLC39A14Q15043 492 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 FSCBQ5H9T9 825 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 ARTNQ5T4W7 220 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 ATAD3BQ5T9A4 648 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 C6orf163Q5TEZ5 329 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 STRIP1Q5VSL9 837 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 SULT1C3Q6IMI6 304 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 DENND1BQ6P3S1 775 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.34□□□□□ -1.39
CHD1-208ENST00000512392 MMP21Q8N119 569 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 CCNYQ8ND76 341 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 WDR60Q8WVS4 1066 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 INPP5DQ92835 1189 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 SLAMF9Q96A28 289 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 RNFT2Q96EX2 444 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 ARL5BQ96KC2 179 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 TRPV6Q9H1D0 765 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 IKZF4Q9H2S9 585 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 GOLPH3LQ9H4A5 285 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 USP29Q9HBJ7 922 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 AGPAT3Q9NRZ7 376 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 KLC4Q9NSK0 619 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 ARL8BQ9NVJ2 186 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 KLHL9Q9P2J3 617 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 LEF1Q9UJU2 399 aaPredicted RBP6.34□□□□□ -1.39
CHD1-208ENST00000512392 DNPEPQ9ULA0 475 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 HPSEQ9Y251 543 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 SPACA6W5XKT8 324 aa6.34□□□□□ -1.39
CHD1-208ENST00000512392 GAKO14976 1311 aa6.34□□□□□ -1.4
CHD1-208ENST00000512392 ZNF536O15090 1300 aa6.34□□□□□ -1.4
CHD1-208ENST00000512392 MYO3BQ8WXR4 1341 aa6.34□□□□□ -1.4
CHD1-208ENST00000512392 A0A0A6YYK5 440 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 SEC31AO94979 1220 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 STAG3L3P0CL85 134 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 GJA4P35212 333 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 THBS2P35442 1172 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ABATP80404 500 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 CAP1Q01518 475 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 PRKCQQ04759 706 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 LAMB3Q13751 1172 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 USP10Q14694 798 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 METAP1DQ6UB28 335 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 HTR3DQ70Z44 454 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ENDOVQ8N8Q3 282 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 FSIP1Q8NA03 581 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 UXS1Q8NBZ7 420 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 EFHD2Q96C19 240 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 KLHL29Q96CT2 875 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 PPP1R10Q96QC0 940 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 WDR83Q9BRX9 315 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 SOX7Q9BT81 388 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 CDADC1Q9BWV3 514 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 EPB41L4BQ9H329 900 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 MANSC1Q9H8J5 431 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 LRRC40Q9H9A6 602 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 RAB20Q9NX57 234 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 BTBD7Q9P203 1132 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 DBR1Q9UK59 544 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 CCPG1Q9ULG6 757 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 X6R8D5 127 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 LOC102723971A0A1B0GUV8 181 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 TCRBV21S2A2A0A5A6 115 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 TARSL2A2RTX5 802 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 OOEPA6NGQ2 149 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ANXA2P2A6NMY6 339 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 SLC38A8A6NNN8 435 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 CDRT15L2A8MXV6 281 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 M0QYT0 321 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 NDUFS8O00217 210 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ATP2A1O14983 1001 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ZSCAN9O15535 394 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 TACC1O75410 805 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 FGBP02675 491 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 FAM86B2P0C5J1 330 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 RALAP11233 206 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 CHN1P15882 459 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 CDKN1AP38936 164 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 WNT3AP56704 352 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 FAM3BP58499 235 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 ABHD18Q0P651 414 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 RAB3GAP1Q15042 981 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 EPC2Q52LR7 807 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ZNF667Q5HYK9 610 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 SPATA46Q5T0L3 261 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 AKNAD1Q5T1N1 836 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 PLA2G4FQ68DD2 849 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 PSRC1Q6PGN9 363 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 SARM1Q6SZW1 724 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 IQCHQ86VS3 1027 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ZNF366Q8N895 744 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 SNX33Q8WV41 574 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ERO1AQ96HE7 468 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 HRASLS5Q96KN8 279 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ZNF560Q96MR9 790 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms