RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ALOX15BO15296 676 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 HNRNPRO43390 633 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIF1CO43896 1103 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NEMFO60524 1076 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ENTPD5O75356 428 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 DEAF1O75398 565 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCGB2A1O75556 95 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 TJP3O95049 919 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 LDOC1O95751 146 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ECDO95905 644 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 CST3P01034 146 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADRB1P08588 477 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRR23D2P0DMB1 279 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 THRAP10827 490 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 HLA-DPA1P20036 260 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPHA3P29320 983 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 GBP1P32455 592 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGDIBP52566 201 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAD23BP54727 409 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPHB1P54762 984 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP2R2BQ00005 443 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 BNC1Q01954 994 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC14A1Q13336 389 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 STXBP2Q15833 593 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF79Q15937 498 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDK4Q16654 411 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NDUFA5Q16718 116 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANO4Q32M45 955 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 MINDY4Q4G0A6 757 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP13A4Q4VNC1 1196 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 VWA3BQ502W6 1294 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 USP39Q53GS9 565 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCAF17Q5H9S7 520 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAB41Q5JT25 222 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 WDR45BQ5MNZ6 344 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 LIN9Q5TKA1 542 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT39Q6A163 491 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SDE2Q6IQ49 451 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 OGFOD2Q6N063 350 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARMC6Q6NXE6 501 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCYL2Q6P3W7 929 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 INTS8Q75QN2 995 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF410Q86VK4 478 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PTRH1Q86Y79 214 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAP7D3Q8IWC1 876 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 BBS7Q8IWZ6 715 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 YAF2Q8IY57 180 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIAA2013Q8IYS2 634 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 UNC5BQ8IZJ1 945 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NPWQ8N729 165 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 OR52K2Q8NGK3 314 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 P3H4Q92791 437 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 TBC1D20Q96BZ9 403 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF653Q96CK0 615 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 TUBGCP3Q96CW5 907 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 REPS1Q96D71 796 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRRFQ96E11 262 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC51Q96ER9 411 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 RSRC1Q96IZ7 334 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC45A3Q96JT2 553 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM161BQ96MY7 647 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 VPS35Q96QK1 796 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NACC1Q96RE7 527 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM167BQ9BTA0 163 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 FRMD8Q9BZ67 464 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 TSGA10Q9BZW7 698 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM192AQ9GZU8 254 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NAA50Q9GZZ1 169 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSTPIP2Q9H939 334 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC40Q9H9A6 602 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NANOGQ9H9S0 305 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 RYDENQ9NUL5 291 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 NMRK1Q9NWW6 199 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 RBAKQ9NYW8 714 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCHIP1Q9P0W5 487 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 MARCH4Q9P2E8 410 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SUN2Q9UH99 717 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 BTBD3Q9Y2F9 522 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPEF1Q9Y4P9 236 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDHB2Q9Y5E7 798 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZFP37Q9Y6Q3 630 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPACA6W5XKT8 324 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRAMEF27A3QJZ7 478 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ASB14A6NK59 587 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 FOXN3O00409 490 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 GYG2O15488 501 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTSS1O43312 755 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 GALR2O43603 387 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRCH4O75427 683 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 WBP4O75554 376 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 URI1O94763 535 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARIH2O95376 493 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 HIST1H2AGP0C0S8 130 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 SRGAP2CP0DJJ0 459 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 AKR1B1P15121 316 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZFXP17010 805 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 HIST1H2ADP20671 130 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP6V1C1P21283 382 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 CA4P22748 312 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRDX6P30041 224 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms