RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ZNF235Q14590 738 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 UGP2Q16851 508 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 FAM182AQ5T1J6 154 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 CFAP58Q5T655 872 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 NCBP2-AS2Q69YL0 99 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 KYAT3Q6YP21 454 aaKnown RBP13.41□□□□□ -0.26
RNF4-215ENST00000511843 GAS2L3Q86XJ1 694 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 CNGA4Q8IV77 575 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 PAF1Q8N7H5 531 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 TC2NQ8N9U0 490 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 CXorf40AQ8TE69 158 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 CNDP2Q96KP4 475 aaKnown RBP13.41□□□□□ -0.26
RNF4-215ENST00000511843 CDC6Q99741 560 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 ATP13A3Q9H7F0 1226 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 MBNL1Q9NR56 388 aaKnown RBP13.41□□□□□ -0.26
RNF4-215ENST00000511843 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 APOBEC2Q9Y235 224 aaKnown RBP13.41□□□□□ -0.26
RNF4-215ENST00000511843 HYOU1Q9Y4L1 999 aa13.41□□□□□ -0.26
RNF4-215ENST00000511843 TSPAN11A1L157 253 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 A8MX80 341 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 FPGTO14772 594 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 FFAR2O15552 330 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 TNFSF14O43557 240 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 MAGEC1O60732 1142 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 SERPINA4P29622 427 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 CSNK1DP48730 415 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 BCL2L1Q07817 233 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 PDE1CQ14123 709 aaPredicted RBP13.4□□□□□ -0.26
RNF4-215ENST00000511843 FZD2Q14332 565 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 RFTN1Q14699 578 aaPredicted RBP13.4□□□□□ -0.26
RNF4-215ENST00000511843 INAVAQ3KP66 663 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 ANKRD20A8PQ5CZ79 823 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 SLC25A45Q8N413 288 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 OXR1Q8N573 874 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.4□□□□□ -0.26
RNF4-215ENST00000511843 ADAMTS14Q8WXS8 1223 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 CENPTQ96BT3 561 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 ZNF641Q96N77 438 aaPredicted RBP13.4□□□□□ -0.26
RNF4-215ENST00000511843 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 TUBGCP5Q96RT8 1024 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 TMEM121BQ9BXQ6 578 aaPredicted RBP13.4□□□□□ -0.26
RNF4-215ENST00000511843 GPR27Q9NS67 375 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 RCOR3Q9P2K3 495 aaPredicted RBP13.4□□□□□ -0.26
RNF4-215ENST00000511843 SEPT3Q9UH03 358 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 PCDHGC4Q9Y5F7 938 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 HS3ST3A1Q9Y663 406 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 CEP295Q9C0D2 2601 aa13.4□□□□□ -0.26
RNF4-215ENST00000511843 GOLGA4Q13439 2230 aaKnown RBP13.39□□□□□ -0.27
RNF4-215ENST00000511843 TRIM38O00635 465 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 ENC1O14682 589 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
RNF4-215ENST00000511843 YKT6O15498 198 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 PIAS2O75928 621 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 TM7SF2O76062 418 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 LDOC1O95751 146 aaPredicted RBP13.39□□□□□ -0.27
RNF4-215ENST00000511843 MYF5P13349 255 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 C6P13671 934 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 TNNT1P13805 278 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 DGKAP23743 735 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 MAN1A1P33908 653 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 SERPINB6P35237 376 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 MMP12P39900 470 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 MMP13P45452 471 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 LIG3P49916 1009 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 ZNF75DP51815 510 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 GBE1Q04446 702 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 ELP6Q0PNE2 266 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 GRM3Q14832 879 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 PTPRRQ15256 657 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 IRF4Q15306 451 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 TMEM52BQ4KMG9 183 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 BRAT1Q6PJG6 821 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 DHRS13Q6UX07 377 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 UNQ6494/PRO21346Q6UXR6 183 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 NYAP1Q6ZVC0 841 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 PQLC3Q8N755 202 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 TP53I13Q8NBR0 393 aaPredicted RBP13.39□□□□□ -0.27
RNF4-215ENST00000511843 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 GATA6Q92908 595 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 ECHDC3Q96DC8 303 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 ZNF599Q96NL3 588 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 LENG8Q96PV6 779 aaPredicted RBP13.39□□□□□ -0.27
RNF4-215ENST00000511843 NOD2Q9HC29 1040 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 NT5MQ9NPB1 228 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 PNMA8BQ9ULN7 279 aaPredicted RBP13.39□□□□□ -0.27
RNF4-215ENST00000511843 ATP8A1Q9Y2Q0 1164 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 NEUROG3Q9Y4Z2 214 aa13.39□□□□□ -0.27
RNF4-215ENST00000511843 SPTY2D1-AS1A0A0U1RR47 76 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 LRRD1A4D1F6 860 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 FAM149AA5PLN7 773 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 TRAFD1O14545 582 aaPredicted RBP13.38□□□□□ -0.27
RNF4-215ENST00000511843 SIGLEC6O43699 453 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 NEBLO76041 1014 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 TRIM16O95361 564 aa13.38□□□□□ -0.27
RNF4-215ENST00000511843 KRT7P08729 469 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms