RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SELENONQ9NZV5 590 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 CNPY2Q9Y2B0 182 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 CACNA1HO95180 2353 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 GVINP1Q7Z2Y8 2422 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 MYH2Q9UKX2 1941 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 A0A1W2PRG0 241 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 LDHCP07864 332 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 ACVR2BQ13705 512 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 DAG1Q14118 895 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 CCDC144NLQ6NUI1 221 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 C16orf89Q6UX73 402 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 DGLUCYQ7Z3D6 616 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 RBM23Q86U06 439 aaKnown RBP7.12□□□□□ -1.27
USP53-206ENST00000510737 TMEM174Q8WUU8 243 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 NUDCD2Q8WVJ2 157 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 GLMPQ8WWB7 406 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 PABPC5Q96DU9 382 aaKnown RBP7.12□□□□□ -1.27
USP53-206ENST00000510737 IQCDQ96DY2 449 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 GJB4Q9NTQ9 266 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 ZHX1Q9UKY1 873 aaPredicted RBP7.12□□□□□ -1.27
USP53-206ENST00000510737 CORO2BQ9UQ03 480 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 INSL5Q9Y5Q6 135 aa7.12□□□□□ -1.27
USP53-206ENST00000510737 ACTN1P12814 892 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 MT3P25713 68 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 TIMM10P62072 90 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 PSMC6P62333 389 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 ANXA2RQ3ZCQ2 193 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 FAXCQ5TGI0 409 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 RAP1GAP2Q684P5 730 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 TRILQ7L0X0 811 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 CCDC28AQ8IWP9 274 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 IQCF1Q8N6M8 205 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 NTPCRQ9BSD7 190 aaKnown RBP7.11□□□□□ -1.27
USP53-206ENST00000510737 SPAG4Q9NPE6 437 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 MDFICQ9P1T7 246 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 FAM50BQ9Y247 325 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 B3GNT3Q9Y2A9 372 aa7.11□□□□□ -1.27
USP53-206ENST00000510737 ASTN1O14525 1302 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 PDS5AQ29RF7 1337 aaKnown RBP7.1□□□□□ -1.27
USP53-206ENST00000510737 LINC01553A4QN01 128 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 CLCA1A8K7I4 914 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 THAP12O43422 761 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 MBTPS2O43462 519 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 CCNT2O60583 730 aaKnown RBP7.1□□□□□ -1.27
USP53-206ENST00000510737 KAT7O95251 611 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 SLC25A27O95847 323 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 IQCF3P0C7M6 154 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 RPL17P18621 184 aaKnown RBP7.1□□□□□ -1.27
USP53-206ENST00000510737 MMP8P22894 467 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 SLC8A1P32418 973 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 GSTO1P78417 241 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 LTBQ06643 244 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 GPNMBQ14956 572 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 TCEAL5Q5H9L2 206 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 GPSM1Q86YR5 675 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 OVCA2Q8WZ82 227 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 ATP2A3Q93084 1043 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 MRPL38Q96DV4 380 aaKnown RBP7.1□□□□□ -1.27
USP53-206ENST00000510737 TGS1Q96RS0 853 aaKnown RBP7.1□□□□□ -1.27
USP53-206ENST00000510737 AATFQ9NY61 560 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP53-206ENST00000510737 IPO11Q9UI26 975 aaKnown RBP7.1□□□□□ -1.27
USP53-206ENST00000510737 LAMP3Q9UQV4 416 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 SNX13Q9Y5W8 968 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 SIPA1L1O43166 1804 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 FRYLO94915 3013 aa7.1□□□□□ -1.27
USP53-206ENST00000510737 ACACBO00763 2458 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 FLT1P17948 1338 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 USP24Q9UPU5 2620 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.09□□□□□ -1.27
USP53-206ENST00000510737 OR2W5A6NFC9 320 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 AREL1O15033 823 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 TSPAN6O43657 245 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 COQ9O75208 318 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 PDGFBP01127 241 aaPredicted RBP7.09□□□□□ -1.27
USP53-206ENST00000510737 SLC5A2P31639 672 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 DEFB103AP81534 67 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 GAD2Q05329 585 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 WDR43Q15061 677 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP53-206ENST00000510737 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.09□□□□□ -1.27
USP53-206ENST00000510737 CAPRIN2Q6IMN6 1127 aaKnown RBP7.09□□□□□ -1.27
USP53-206ENST00000510737 PPP4R4Q6NUP7 873 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 FAM177A1Q8N128 213 aaPredicted RBP7.09□□□□□ -1.27
USP53-206ENST00000510737 ATP11CQ8NB49 1132 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 MED30Q96HR3 178 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 ZNF347Q96SE7 839 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 RAD9AQ99638 391 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 FTOQ9C0B1 505 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP53-206ENST00000510737 SIL1Q9H173 461 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 ALDH8A1Q9H2A2 487 aaPredicted RBP7.09□□□□□ -1.27
USP53-206ENST00000510737 RAI14Q9P0K7 980 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 HMG20BQ9P0W2 317 aa7.09□□□□□ -1.27
USP53-206ENST00000510737 FAM186AA6NE01 2351 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 TPRP12270 2363 aaKnown RBP7.08□□□□□ -1.28
USP53-206ENST00000510737 MYH13Q9UKX3 1938 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 ZSCAN9O15535 394 aaPredicted RBP7.08□□□□□ -1.28
USP53-206ENST00000510737 KRT86O43790 486 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 CABYRO75952 493 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 FLOT1O75955 427 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 GJB5O95377 273 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 IFNA2P01563 188 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms