RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GIMD1P0DJR0 217 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 RARAP10276 462 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 AMPD1P23109 780 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 HNRNPKP61978 463 aaKnown RBP eCLIP23.19■■□□□ 1.3
SNF8-209ENST00000510558 RFTN1Q14699 578 aaPredicted RBP23.19■■□□□ 1.3
SNF8-209ENST00000510558 UGP2Q16851 508 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 TMEM52BQ4KMG9 183 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 TPRG1LQ5T0D9 272 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 CFAP58Q5T655 872 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 BRAT1Q6PJG6 821 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 PROSER1Q86XN7 944 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 CAMK1DQ8IU85 385 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 TEKT4Q8WW24 435 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 CSPG4P5Q96PW8 444 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 ATP13A3Q9H7F0 1226 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 PCDH12Q9NPG4 1184 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 ETNK2Q9NVF9 386 aa23.19■■□□□ 1.3
SNF8-209ENST00000510558 TAF4O00268 1085 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 CSF2P04141 144 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 NME1P15531 152 aaKnown RBP23.18■■□□□ 1.3
SNF8-209ENST00000510558 ACP1P24666 158 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 CLDN6P56747 220 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 SLC25A11Q02978 314 aaKnown RBP23.18■■□□□ 1.3
SNF8-209ENST00000510558 ILKQ13418 452 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 CAMK2BQ13554 666 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 TMCO3Q6UWJ1 677 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 TP53I13Q8NBR0 393 aaPredicted RBP23.18■■□□□ 1.3
SNF8-209ENST00000510558 MDM1Q8TC05 714 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 PCDH18Q9HCL0 1135 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 NENFQ9UMX5 172 aa23.18■■□□□ 1.3
SNF8-209ENST00000510558 NEMP2A6NFY4 417 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 H3BM21 787 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 MYO1FO00160 1098 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 ALPPL2P10696 532 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 SERPINA4P29622 427 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 HNRNPH3P31942 346 aaKnown RBP23.17■■□□□ 1.3
SNF8-209ENST00000510558 DAB2P98082 770 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 LBRQ14739 615 aaKnown RBP23.17■■□□□ 1.3
SNF8-209ENST00000510558 TMCO4Q5TGY1 634 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 ERAP2Q6P179 960 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 ZSWIM9Q86XI8 627 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 ZNF548Q8NEK5 533 aaPredicted RBP23.17■■□□□ 1.3
SNF8-209ENST00000510558 MBNL1Q9NR56 388 aaKnown RBP23.17■■□□□ 1.3
SNF8-209ENST00000510558 NLGN3Q9NZ94 848 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 SEPT3Q9UH03 358 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 KLF15Q9UIH9 416 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 ATP8A1Q9Y2Q0 1164 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 COQ6Q9Y2Z9 468 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 WDFY3Q8IZQ1 3526 aa23.17■■□□□ 1.3
SNF8-209ENST00000510558 TRABD2BA6NFA1 517 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 RIOK3O14730 519 aaKnown RBP23.16■■□□□ 1.3
SNF8-209ENST00000510558 SCAMP1O15126 338 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 MUSKO15146 869 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 C6P13671 934 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 HNF1BP35680 557 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 EIF4A3P38919 411 aaKnown RBP23.16■■□□□ 1.3
SNF8-209ENST00000510558 MMP12P39900 470 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 THOP1P52888 689 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 BCL2L1Q07817 233 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 NSUN2Q08J23 767 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNF8-209ENST00000510558 EIF2B5Q13144 721 aaKnown RBP23.16■■□□□ 1.3
SNF8-209ENST00000510558 HES3Q5TGS1 186 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 ZNF564Q8TBZ8 553 aaPredicted RBP23.16■■□□□ 1.3
SNF8-209ENST00000510558 ZNF599Q96NL3 588 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 PSKH2Q96QS6 385 aa23.16■■□□□ 1.3
SNF8-209ENST00000510558 CBFA2T2O43439 604 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 NEBLO76041 1014 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 PRKCGP05129 697 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 JUPP14923 745 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 JUNDP17535 347 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 SSR1P43307 286 aaKnown RBP23.15■■□□□ 1.3
SNF8-209ENST00000510558 SCNN1BP51168 640 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 RENBPP51606 427 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 YPEL5P62699 121 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 SLC10A7Q0GE19 358 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 PTK2BQ14289 1009 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 IRF4Q15306 451 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 SPECC1LQ69YQ0 1117 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 PDCD7Q8N8D1 485 aaKnown RBP23.15■■□□□ 1.3
SNF8-209ENST00000510558 ECHDC3Q96DC8 303 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 DUSP23Q9BVJ7 150 aa23.15■■□□□ 1.3
SNF8-209ENST00000510558 ACACAQ13085 2346 aa23.14■■□□□ 1.3
SNF8-209ENST00000510558 K7ESM1 405 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 TOR1BO14657 336 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 SERPINB6P35237 376 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 CDH6P55285 790 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 AP1S1P61966 158 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 SEMG2Q02383 582 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 TRIM14Q14142 442 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 KRT81Q14533 505 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 ZNF235Q14590 738 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 LRRC14Q15048 493 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 HADHQ16836 314 aaKnown RBP23.14■■□□□ 1.29
SNF8-209ENST00000510558 WSCD2Q2TBF2 565 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 PAF1Q8N7H5 531 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 APOLD1Q96LR9 279 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 NSMCE3Q96MG7 304 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 DKK4Q9UBT3 224 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 CSNK1G3Q9Y6M4 447 aa23.14■■□□□ 1.29
SNF8-209ENST00000510558 APC2O95996 2303 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms