RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 NUP85Q9BW27 656 aa21.43■■□□□ 1.02
LIN54-208ENST00000509748 MBNL1Q9NR56 388 aaKnown RBP21.43■■□□□ 1.02
LIN54-208ENST00000509748 DNAJC28Q9NX36 388 aa21.43■■□□□ 1.02
LIN54-208ENST00000509748 IPO11Q9UI26 975 aaKnown RBP21.43■■□□□ 1.02
LIN54-208ENST00000509748 MYLKQ15746 1914 aa21.43■■□□□ 1.02
LIN54-208ENST00000509748 FAM208BQ5VWN6 2430 aa21.43■■□□□ 1.02
LIN54-208ENST00000509748 TRABD2BA6NFA1 517 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 DFFAO00273 331 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 PALMO75781 387 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 TM7SF2O76062 418 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 PEX11BO96011 259 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 CDK4P11802 303 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 NME1P15531 152 aaKnown RBP21.42■■□□□ 1.02
LIN54-208ENST00000509748 NSUN2Q08J23 767 aaKnown RBP eCLIP21.42■■□□□ 1.02
LIN54-208ENST00000509748 EIF2B5Q13144 721 aaKnown RBP21.42■■□□□ 1.02
LIN54-208ENST00000509748 ILKQ13418 452 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 PDE1CQ14123 709 aaPredicted RBP21.42■■□□□ 1.02
LIN54-208ENST00000509748 LZTR1Q8N653 840 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 TP53I13Q8NBR0 393 aaPredicted RBP21.42■■□□□ 1.02
LIN54-208ENST00000509748 MDM1Q8TC05 714 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 CSPG4P5Q96PW8 444 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 TUBGCP5Q96RT8 1024 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 WRAP53Q9BUR4 548 aaKnown RBP21.42■■□□□ 1.02
LIN54-208ENST00000509748 ZWILCHQ9H900 591 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 PCDH12Q9NPG4 1184 aa21.42■■□□□ 1.02
LIN54-208ENST00000509748 PNMA8BQ9ULN7 279 aaPredicted RBP21.42■■□□□ 1.02
LIN54-208ENST00000509748 URB1O60287 2271 aaKnown RBP21.41■■□□□ 1.02
LIN54-208ENST00000509748 ASXL3Q9C0F0 2248 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 LY6G6EA0A0G2JKS1 128 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 H3BRJ5 948 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 RIOK3O14730 519 aaKnown RBP21.41■■□□□ 1.02
LIN54-208ENST00000509748 FFAR2O15552 330 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 HNRNPKP61978 463 aaKnown RBP eCLIP21.41■■□□□ 1.02
LIN54-208ENST00000509748 RFTN1Q14699 578 aaPredicted RBP21.41■■□□□ 1.02
LIN54-208ENST00000509748 NFKBIBQ15653 356 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 CCDC122Q5T0U0 273 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 PARGQ86W56 976 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 CXorf40AQ8TE69 158 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 TEKT4Q8WW24 435 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 HSPH1Q92598 858 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 ECHDC3Q96DC8 303 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 CCDC86Q9H6F5 360 aaKnown RBP21.41■■□□□ 1.02
LIN54-208ENST00000509748 SP110Q9HB58 689 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 PCDH18Q9HCL0 1135 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.41■■□□□ 1.02
LIN54-208ENST00000509748 DKK4Q9UBT3 224 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 IP6K2Q9UHH9 426 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 ANAPC7Q9UJX3 599 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 U3KQA8 63 aa21.41■■□□□ 1.02
LIN54-208ENST00000509748 CELSR3Q9NYQ7 3312 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 SCAMP1O15126 338 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 IL4RP24394 825 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 SLC10A7Q0GE19 358 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 ELP6Q0PNE2 266 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 SKOR2Q2VWA4 1001 aaPredicted RBP21.4■■□□□ 1.02
LIN54-208ENST00000509748 BRAT1Q6PJG6 821 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 CPNE8Q86YQ8 564 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 ZNF548Q8NEK5 533 aaPredicted RBP21.4■■□□□ 1.02
LIN54-208ENST00000509748 FAM71BQ8TC56 605 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 PSKH2Q96QS6 385 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 NLGN3Q9NZ94 848 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 COQ6Q9Y2Z9 468 aa21.4■■□□□ 1.02
LIN54-208ENST00000509748 K7ESM1 405 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 TRAFD1O14545 582 aaPredicted RBP21.39■■□□□ 1.01
LIN54-208ENST00000509748 NEBLO76041 1014 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 PRKCGP05129 697 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 EIF4A3P38919 411 aaKnown RBP21.39■■□□□ 1.01
LIN54-208ENST00000509748 MMP12P39900 470 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 ARL4AP40617 200 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 ARSEP51690 589 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 YPEL5P62699 121 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 SEMG2Q02383 582 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 ASTE1Q2TB18 679 aaPredicted RBP21.39■■□□□ 1.01
LIN54-208ENST00000509748 WSCD2Q2TBF2 565 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 PDCD7Q8N8D1 485 aaKnown RBP21.39■■□□□ 1.01
LIN54-208ENST00000509748 RFFLQ8WZ73 363 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 ZNF599Q96NL3 588 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 CINPQ9BW66 212 aaPredicted RBP21.39■■□□□ 1.01
LIN54-208ENST00000509748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.39■■□□□ 1.01
LIN54-208ENST00000509748 CSNK1G3Q9Y6M4 447 aa21.39■■□□□ 1.01
LIN54-208ENST00000509748 MAFKO60675 156 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 CKMT1AP12532 417 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 MYF5P13349 255 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 C6P13671 934 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 JUPP14923 745 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 XPAP23025 273 aaPredicted RBP21.38■■□□□ 1.01
LIN54-208ENST00000509748 LBRQ14739 615 aaKnown RBP21.38■■□□□ 1.01
LIN54-208ENST00000509748 AGERQ15109 404 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 IRF4Q15306 451 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 HES3Q5TGS1 186 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 TMCO4Q5TGY1 634 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 TMCO3Q6UWJ1 677 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 PGBD5Q8N414 524 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 FAM181AQ8N9Y4 354 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 APOLD1Q96LR9 279 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 TCEAL2Q9H3H9 227 aaPredicted RBP21.38■■□□□ 1.01
LIN54-208ENST00000509748 ATP13A3Q9H7F0 1226 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 SEPT3Q9UH03 358 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 ATP8A1Q9Y2Q0 1164 aa21.38■■□□□ 1.01
LIN54-208ENST00000509748 ITPR1Q14643 2758 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms