RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 UBA2Q9UBT2 640 aaPredicted RBP13.48□□□□□ -0.25
SDHA-210ENST00000509420 HPCAL4Q9UM19 191 aa13.48□□□□□ -0.25
SDHA-210ENST00000509420 COQ6Q9Y2Z9 468 aa13.48□□□□□ -0.25
SDHA-210ENST00000509420 PCDHB1Q9Y5F3 818 aa13.48□□□□□ -0.25
SDHA-210ENST00000509420 KIF26BQ2KJY2 2108 aa13.48□□□□□ -0.25
SDHA-210ENST00000509420 HELZ2Q9BYK8 2649 aaKnown RBP13.47□□□□□ -0.25
SDHA-210ENST00000509420 EEF2KO00418 725 aaKnown RBP13.47□□□□□ -0.25
SDHA-210ENST00000509420 TRAFD1O14545 582 aaPredicted RBP13.47□□□□□ -0.25
SDHA-210ENST00000509420 CDK4P11802 303 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 AGERQ15109 404 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 IRF4Q15306 451 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 TTC7BQ86TV6 843 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 VPS36Q86VN1 386 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 CPNE8Q86YQ8 564 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 PELI3Q8N2H9 469 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 WRAP53Q9BUR4 548 aaKnown RBP13.47□□□□□ -0.25
SDHA-210ENST00000509420 LRRC61Q9BV99 259 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 NRSN2Q9GZP1 204 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 PCDH12Q9NPG4 1184 aa13.47□□□□□ -0.25
SDHA-210ENST00000509420 CNOT8Q9UFF9 292 aaKnown RBP13.47□□□□□ -0.25
SDHA-210ENST00000509420 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 SMTNL1A8MU46 457 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 FPGTO14772 594 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 OPA1O60313 960 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 JUPP14923 745 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 CR2P20023 1033 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 CSNK1DP48730 415 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 HCAR3P49019 387 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 HNRNPKP61978 463 aaKnown RBP eCLIP13.46□□□□□ -0.25
SDHA-210ENST00000509420 SLC25A11Q02978 314 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 KLHL30Q0D2K2 578 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 IHHQ14623 411 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 DPYSL2Q16555 572 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 UGP2Q16851 508 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 KLHL40Q2TBA0 621 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 PDZD3Q86UT5 571 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 PSTKQ8IV42 348 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 PGBD5Q8N414 524 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 HCAR2Q8TDS4 363 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 ZNF653Q96CK0 615 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 BOCQ9BWV1 1114 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 NAT10Q9H0A0 1025 aaKnown RBP13.46□□□□□ -0.25
SDHA-210ENST00000509420 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 CSNK1G3Q9Y6M4 447 aa13.46□□□□□ -0.25
SDHA-210ENST00000509420 A0A1W2PQJ5 194 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SYCE3A1L190 88 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 PMS2P1A4D2B8 440 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 ANKRD62A6NC57 917 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 AQP9O43315 295 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 MT-CO3P00414 261 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 GP1BAP07359 652 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 C6P13671 934 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 JUNDP17535 347 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 IL4RP24394 825 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 ITPKBP27987 946 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 PCK1P35558 622 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 HNF1BP35680 557 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 PDX1P52945 283 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 FANCCQ00597 558 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SLC10A7Q0GE19 358 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SGCGQ13326 291 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 DEFB133Q30KQ1 61 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 PERM1Q5SV97 790 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 PPP1R2P3Q6NXS1 205 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 GUSBP11Q6P575 273 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 MACC1Q6ZN28 852 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 POLNQ7Z5Q5 900 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SRLQ86TD4 932 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SLC35F3Q8IY50 421 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 NXPE2Q96DL1 559 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 BTBD6Q96KE9 485 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 CLCA2Q9UQC9 943 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 SHROOM3Q8TF72 1996 aa13.45□□□□□ -0.26
SDHA-210ENST00000509420 A0A087X0T9 212 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 NEMP1O14524 444 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 BRINP1O60477 761 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 TM7SF2O76062 418 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 GYPCP04921 128 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 FAM228BP0C875 321 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 TGM2P21980 687 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 EIF2S3P41091 472 aaKnown RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 LIG3P49916 1009 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 ARSEP51690 589 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 YPEL5P62699 121 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 C1orf61Q13536 156 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 ALG11Q2TAA5 492 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms