RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ETFBP38117 255 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 RGRP47804 291 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 LSSP48449 732 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZNF143P52747 638 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 PDX1P52945 283 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ADKP55263 362 aaKnown RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SKOR1P84550 965 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SGCGQ13326 291 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SERINC3Q13530 473 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 C1orf61Q13536 156 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 NCAPHQ15003 741 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SYCP1Q15431 976 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 CA9Q16790 459 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ISXQ2M1V0 245 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ARL13BQ3SXY8 428 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 INO80DQ53TQ3 878 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZCCHC8Q6NZY4 707 aaKnown RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 CRTC1Q6UUV9 634 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SLFN11Q7Z7L1 901 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 TTC7BQ86TV6 843 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 VPS36Q86VN1 386 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 UMODL1-AS1Q8N2C9 162 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 RYBPQ8N488 228 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 RTL3Q8N8U3 475 aaKnown RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 MSANTD4Q8NCY6 345 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 C3orf20Q8ND61 904 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 DENND6BQ8NEG7 585 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 LMX1AQ8TE12 382 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 RAB7BQ96AH8 199 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ATXN7L3BQ96GX2 97 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 EXOC2Q96KP1 924 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 FCRL3Q96P31 734 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 UBL7Q96S82 380 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 WRAP53Q9BUR4 548 aaKnown RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 USP29Q9HBJ7 922 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 TAS2R14Q9NYV8 317 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 DKK3Q9UBP4 350 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 LIMA1Q9UHB6 759 aaKnown RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SALL4Q9UJQ4 1053 aa6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 ARHGEF17Q96PE2 2063 aaPredicted RBP6.51□□□□□ -1.37
HMGN1P16-201ENST00000508308 SCN8AQ9UQD0 1980 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TSPAN11A1L157 253 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZSCAN5CA6NGD5 496 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 LGALS16A8MUM7 142 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 RASA4BC9J798 803 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 LMO7DNF2Z398 122 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 NEMP1O14524 444 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TPP1O14773 563 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 YY2O15391 372 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 RRP8O43159 456 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 RASA4O43374 803 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZIC2O95409 532 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 PIGNO95427 931 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 PRKCGP05129 697 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 CALB1P05937 261 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ALPPL2P10696 532 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TSHRP16473 764 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 GM2AP17900 193 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 EPHB2P29323 1055 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 EIF4A3P38919 411 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 STAT1P42224 750 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 NSFP46459 744 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 GSK3AP49840 483 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 GEMIN4P57678 1058 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 RHOAP61586 193 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 SNRPD1P62314 119 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 GABREP78334 506 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 IRF4Q15306 451 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 KLHL40Q2TBA0 621 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 WSCD2Q2TBF2 565 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TMEM52BQ4KMG9 183 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 PRRT3Q5FWE3 981 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 AFMIDQ63HM1 303 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 IGF2-ASQ6U949 168 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TRIM72Q6ZMU5 477 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 LRRC69Q6ZNQ3 347 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 CYP4V2Q6ZWL3 525 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 EFL1Q7Z2Z2 1120 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 IRF2BP2Q7Z5L9 587 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZSCAN30Q86W11 494 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 DNAAF5Q86Y56 855 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 SFTPA2Q8IWL1 248 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ARHGAP12Q8IWW6 846 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 TP53INP2Q8IXH6 220 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 MCOLN2Q8IZK6 566 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZNF843Q8N446 348 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 MAPK15Q8TD08 544 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 NAF1Q96HR8 494 aaKnown RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 GDAP1L1Q96MZ0 367 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ZNF578Q96N58 590 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 SLC46A1Q96NT5 459 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 MCEEQ96PE7 176 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 DEPDC7Q96QD5 511 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 ERGIC2Q96RQ1 377 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 PEBP4Q96S96 227 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 EPAS1Q99814 870 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 AGPAT1Q99943 283 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 CNPY3Q9BT09 278 aa6.5□□□□□ -1.37
HMGN1P16-201ENST00000508308 DUSP23Q9BVJ7 150 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms