RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 TRIM16O95361 564 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 IGLV1-40P01703 118 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ALPPP05187 535 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 MMP2P08253 660 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 FAM58BPP0C7Q3 252 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ALPPL2P10696 532 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 PDHBP11177 359 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 SFTPCP11686 197 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ITGB5P18084 799 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 KRT4P19013 534 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ITGALP20701 1170 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 IL10P22301 178 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 PPIFP30405 207 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 HOXA13P31271 388 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 MCM5P33992 734 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 HSPA4P34932 840 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 IL13P35225 146 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 RAB28P51157 221 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 RPS6KA3P51812 740 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 B4GALNT1Q00973 533 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 CYP4A11Q02928 519 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ZNF844Q08AG5 666 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ALKBH1Q13686 389 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 PGM5Q15124 567 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 RPS6KA1Q15418 735 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 OASLQ15646 514 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 DLG2Q15700 870 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 KRT79Q5XKE5 535 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 HMBOX1Q6NT76 420 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 FAM160B2Q86V87 743 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ZDHHC13Q8IUH4 622 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 P3H2Q8IVL5 708 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 FBXW8Q8N3Y1 598 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 CPXM2Q8N436 756 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 C11orf65Q8NCR3 313 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 GMCL1P1Q8NEA9 526 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 GRAPLQ8TC17 118 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 OSCP1Q8WVF1 389 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ATG4AQ8WYN0 398 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 LPPQ93052 612 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 VPS50Q96JG6 964 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 CFAP53Q96M91 514 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 GDAP1L1Q96MZ0 367 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 CDRT15Q96T59 188 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 NEU1Q99519 415 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 PIMREGQ9BSJ6 248 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 RANGRFQ9HD47 186 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 PAPOLBQ9NRJ5 636 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 BABAM1Q9NWV8 329 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 DLGAP2Q9P1A6 1054 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 NKX1-2Q9UD57 310 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 VPS4AQ9UN37 437 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 TEX264Q9Y6I9 313 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 ERICH3Q5RHP9 1530 aa4.1□□□□□ -1.75
ATP2C1-213ENST00000508297 EDDM13A0A1B0GTR0 161 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 ANXA2P2A6NMY6 339 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 KPNA7A9QM74 516 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 VWA5AO00534 786 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 FFAR3O14843 346 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GPR42O15529 346 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 SPRY2O43597 315 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 NOL3O60936 208 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 NME6O75414 186 aaPredicted RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 AKAP3O75969 853 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 NKX2-2O95096 273 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 LETM1O95202 739 aaPredicted RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 SRPRAP08240 638 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 UROSP10746 265 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 SRCP12931 536 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 ACHEP22303 614 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GLDCP23378 1020 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GCSHP23434 173 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GJC1P36383 396 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 IGHMBP2P38935 993 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 IFNAR2P48551 515 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 NDUFV1P49821 464 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 MTHFSP49914 203 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 TRA2BP62995 288 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 ASIC1P78348 528 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GRSF1Q12849 480 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 IFT88Q13099 833 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 RNPS1Q15287 305 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GXYLT1Q4G148 440 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 TTC39AQ5SRH9 613 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 C12orf60Q5U649 245 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 TXNDC8Q6A555 127 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 SLC25A24Q6NUK1 477 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 MOXD1Q6UVY6 613 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 NHLRC1Q6VVB1 395 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 PLEKHM3Q6ZWE6 761 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 USP30Q70CQ3 517 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 LPCAT2Q7L5N7 544 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 RALYLQ86SE5 291 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GPAT4Q86UL3 456 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 SYT12Q8IV01 421 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 KLHL7Q8IXQ5 586 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 GUF1Q8N442 669 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 KYQ8NBH2 561 aa4.09□□□□□ -1.75
ATP2C1-213ENST00000508297 RBM15BQ8NDT2 890 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms