RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 DRC3Q9H069 523 aa17.79■□□□□ 0.44
SFXN1-208ENST00000507823 AGO1Q9UL18 857 aaKnown RBP17.79■□□□□ 0.44
SFXN1-208ENST00000507823 RUVBL2Q9Y230 463 aaKnown RBP17.79■□□□□ 0.44
SFXN1-208ENST00000507823 OBSL1O75147 1896 aa17.79■□□□□ 0.44
SFXN1-208ENST00000507823 TTC24A2A3L6 582 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 AOC1P19801 751 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 CES1P23141 567 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 SLC8A1P32418 973 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 IDH3AP50213 366 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 CNSTQ6PJW8 725 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 ZNF783Q6ZMS7 281 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 LONP2Q86WA8 852 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 FSTL5Q8N475 847 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 DDX50Q9BQ39 737 aaKnown RBP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 CADM1Q9BY67 442 aaKnown RBP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 BAIAP2L1Q9UHR4 511 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 A8MUI8 341 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 TK2O00142 265 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 NDST3O95803 873 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 SERPINF2P08697 491 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 ARSDP51689 593 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 NSUN2Q08J23 767 aaKnown RBP eCLIP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 VEPH1Q14D04 833 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 FAM13CQ8NE31 585 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 BRSK1Q8TDC3 778 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 CDH19Q9H159 772 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 MMADHCQ9H3L0 296 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 TMEM39AQ9NV64 488 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
SFXN1-208ENST00000507823 UBA2Q9UBT2 640 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-208ENST00000507823 AURKAO14965 403 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 GJB3O75712 270 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 OLFM2O95897 454 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 WASHC2DQ5SRD0 308 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 IFT43Q96FT9 208 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 ELMO2Q96JJ3 720 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 GKN1Q9NS71 199 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 IGSF5Q9NSI5 407 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 TAS2R1Q9NYW7 299 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 ARMCX1Q9P291 453 aa17.77■□□□□ 0.44
SFXN1-208ENST00000507823 ARIH1Q9Y4X5 557 aaPredicted RBP17.77■□□□□ 0.44
SFXN1-208ENST00000507823 GSC2O15499 205 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 LILRB3O75022 631 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 S1PR4O95977 384 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 CLTBP09497 229 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 ESRRAP11474 423 aaPredicted RBP17.77■□□□□ 0.43
SFXN1-208ENST00000507823 SLC26A3P40879 764 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 SGSHP51688 502 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 KPNA2P52292 529 aaKnown RBP17.77■□□□□ 0.43
SFXN1-208ENST00000507823 OXCT1P55809 520 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 PLD1Q13393 1074 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 CXorf57Q6NSI4 855 aaKnown RBP17.77■□□□□ 0.43
SFXN1-208ENST00000507823 EPGNQ6UW88 154 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 WBP2Q969T9 261 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 NXNL1Q96CM4 212 aa17.77■□□□□ 0.43
SFXN1-208ENST00000507823 MRPL57Q9BQC6 102 aaKnown RBP17.77■□□□□ 0.43
SFXN1-208ENST00000507823 MRPL46Q9H2W6 279 aaKnown RBP17.77■□□□□ 0.43
SFXN1-208ENST00000507823 CORO1CQ9ULV4 474 aaPredicted RBP17.77■□□□□ 0.43
SFXN1-208ENST00000507823 C2orf78A6NCI8 922 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 GREM1O60565 184 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 EFCAB14O75071 495 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 SNUPNO95149 360 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 AVPR1AP37288 418 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 NUMBP49757 651 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 DNAJB13P59910 316 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF789Q5FWF6 425 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 RBM20Q5T481 1227 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 DNAJB7Q7Z6W7 309 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 SCG3Q8WXD2 468 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 HDAC10Q969S8 669 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 TSPAN17Q96FV3 270 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 UBXN10Q96LJ8 280 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 NSMCE3Q96MG7 304 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 TAGLN3Q9UI15 199 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 APOBEC2Q9Y235 224 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 RAP2CQ9Y3L5 183 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 F11P03951 625 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 URODP06132 367 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 RHOCP08134 193 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 CCND1P24385 295 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 DEFB103AP81534 67 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF177Q13360 481 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 CYTH1Q15438 398 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 IL31Q6EBC2 164 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 RINLQ6ZS11 566 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 DIS3LQ8TF46 1054 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 OLFM1Q99784 485 aa17.76■□□□□ 0.43
SFXN1-208ENST00000507823 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.76■□□□□ 0.433e-6■□□□□ 10.1
SFXN1-208ENST00000507823 CPSF2Q9P2I0 782 aaKnown RBP17.76■□□□□ 0.43
SFXN1-208ENST00000507823 DLX3O60479 287 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 HSPA4LO95757 839 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 HOXB8P17481 243 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 TWF1Q12792 350 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 RCN2Q14257 317 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF460Q14592 562 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 FAM217AQ8IXS0 508 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms