RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLC6A17Q9H1V8 727 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 RSPH9Q9H1X1 276 aaPredicted RBP14.31□□□□□ -0.12
RNF4-208ENST00000507247 CHRDQ9H2X0 955 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 MFSD1Q9H3U5 465 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 SUV39H2Q9H5I1 410 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 FAM114A2Q9NRY5 505 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 GOLGA6AQ9NYA3 693 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 ANAPC5Q9UJX4 755 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 SHOC2Q9UQ13 582 aa14.31□□□□□ -0.12
RNF4-208ENST00000507247 PGLSO95336 258 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 PRNPP04156 253 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 DCNP07585 359 aaKnown RBP14.3□□□□□ -0.12
RNF4-208ENST00000507247 PSMD8P48556 350 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 CARSP49589 748 aaKnown RBP14.3□□□□□ -0.12
RNF4-208ENST00000507247 SATB1Q01826 763 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 CDK18Q07002 472 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 CALCOCO2Q13137 446 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 GALNT3Q14435 633 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 SLC1A5Q15758 541 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 CRY1Q16526 586 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 ARMC12Q5T9G4 340 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 NAPEPLDQ6IQ20 393 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 DENND5AQ6IQ26 1287 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 RANBP10Q6VN20 620 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 SYT13Q7L8C5 426 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 CACUL1Q86Y37 369 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 SLC25A41Q8N5S1 370 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 BBOF1Q8ND07 529 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 MCUQ8NE86 351 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 TMIEQ8NEW7 156 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 OR52K1Q8NGK4 314 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 FBXO25Q8TCJ0 367 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 PDCD6IPQ8WUM4 868 aaKnown RBP14.3□□□□□ -0.12
RNF4-208ENST00000507247 LRIG1Q96JA1 1093 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 PWWP2AQ96N64 755 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 ZNF641Q96N77 438 aaPredicted RBP14.3□□□□□ -0.12
RNF4-208ENST00000507247 SMIM14Q96QK8 99 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 OSBPL1AQ9BXW6 950 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
RNF4-208ENST00000507247 CASS4Q9NQ75 786 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 ZDHHC18Q9NUE0 388 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 PIH1D1Q9NWS0 290 aaKnown RBP14.3□□□□□ -0.12
RNF4-208ENST00000507247 SIT1Q9Y3P8 196 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 PCDHB9Q9Y5E1 797 aa14.3□□□□□ -0.12
RNF4-208ENST00000507247 TSPAN11A1L157 253 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 TMEM221A6NGB7 291 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 M0R296 226 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 PLK4O00444 970 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 KPNA3O00505 521 aaPredicted RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 PI15O43692 258 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 NDST3O95803 873 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 CPP00450 1065 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 IL1BP01584 269 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 EPOP01588 193 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 PRKCGP05129 697 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 RPS9P46781 194 aaKnown RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 PLTPP55058 493 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 RPS14P62263 151 aaKnown RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 CDK16Q00536 496 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 MTM1Q13496 603 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 ELF2Q15723 593 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 CST6Q15828 149 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 SIRPB2Q5JXA9 342 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 ZNF776Q68DI1 518 aaPredicted RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 PARS2Q7L3T8 475 aaKnown RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 DSG4Q86SJ6 1040 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 CAND1Q86VP6 1230 aaKnown RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 IFT20Q8IY31 132 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 LPCAT1Q8NF37 534 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 MYRIPQ8NFW9 859 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 PIH1D2Q8WWB5 315 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 IFT81Q8WYA0 676 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 SERPINB12Q96P63 405 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 FBRSQ9HAH7 460 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 DLGAP2Q9P1A6 1054 aa14.29□□□□□ -0.12
RNF4-208ENST00000507247 ARIH1Q9Y4X5 557 aaPredicted RBP14.29□□□□□ -0.12
RNF4-208ENST00000507247 TCRBV21S2A2A0A5A6 115 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 C1QTNF3-AMACRE9PGA6 284 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 SMAPO00193 183 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 MID1O15344 667 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 AVILO75366 819 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 MYBL2P10244 700 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 ALADP13716 330 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 GABRG2P18507 467 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 NDUFV2P19404 249 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 HLA-DPA1P20036 260 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 CA4P22748 312 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 ITGB7P26010 798 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 TNFRSF8P28908 595 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 SLC8A1P32418 973 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 VSNL1P62760 191 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 MSLNQ13421 630 aaPredicted RBP14.28□□□□□ -0.12
RNF4-208ENST00000507247 CUL1Q13616 776 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 PTPRRQ15256 657 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 QPCTQ16769 361 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 LRRK1Q38SD2 2015 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 LRRC73Q5JTD7 316 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 FNBP1LQ5T0N5 605 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms