RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 EDN1P05305 212 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 LRPAP1P30533 357 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 INCA1Q0VD86 236 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 RBM48Q5RL73 367 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 TREML2Q5T2D2 321 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CYP2R1Q6VVX0 501 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 C2orf69Q8N8R5 385 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 TRPV3Q8NET8 790 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CYGBQ8WWM9 190 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CENPIQ92674 756 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 SH3YL1Q96HL8 342 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 PPP1R36Q96LQ0 422 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 SMARCAD1Q9H4L7 1026 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 KLHL3Q9UH77 587 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 ZNF112Q9UJU3 913 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 VANGL2Q9ULK5 521 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 AP4E1Q9UPM8 1137 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 IFT52Q9Y366 437 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 DOCK1Q14185 1865 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 PHGDHO43175 533 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 GAS2O43903 313 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CAPN15O75808 1086 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 SBK3P0C264 359 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CYP2C8P10632 490 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 GSTM2P28161 218 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 RPS9P46781 194 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 LEPRP48357 1165 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 HUNKP57058 714 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 GNA12Q03113 381 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 RALGDSQ12967 914 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 AGKQ53H12 422 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 COQ5Q5HYK3 327 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 PTAR1Q7Z6K3 402 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 SAPCD2Q86UD0 394 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 KCNMB4Q86W47 210 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 EXOC8Q8IYI6 725 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 TBC1D21Q8IYX1 336 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 PARP8Q8N3A8 854 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 MINDY1Q8N5J2 469 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 RNF169Q8NCN4 708 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 NSUN6Q8TEA1 469 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 WNK4Q96J92 1243 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 NSMCE3Q96MG7 304 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 HEXIM2Q96MH2 286 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 FCRL3Q96P31 734 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 MTG1Q9BT17 334 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 ELP3Q9H9T3 547 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 IFT80Q9P2H3 777 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 ABT1Q9ULW3 272 aaKnown RBP16.01■□□□□ 0.15
SCLT1-208ENST00000506368 NDUFAF1Q9Y375 327 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 CROCCQ5TZA2 2017 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 TTC24A2A3L6 582 aaPredicted RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 TMEM88BA6NKF7 163 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 TMX2-CTNND1H3BSU7 103 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 RSL1D1O76021 490 aaKnown RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 SEC24DO94855 1032 aaPredicted RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 AP2A1O95782 977 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 RAP1GAPP47736 663 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 ADARB1P78563 741 aaKnown RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 MPZL3Q6UWV2 235 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 SLC26A9Q7LBE3 791 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 PAPD5Q8NDF8 572 aaKnown RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 PIK3C3Q8NEB9 887 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 ABHD11Q8NFV4 315 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 PTCD2Q8WV60 388 aaKnown RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 MRPL46Q9H2W6 279 aaKnown RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 TPK1Q9H3S4 243 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 CASS4Q9NQ75 786 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 NRBP2Q9NSY0 501 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 ZNF639Q9UID6 485 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 RUVBL2Q9Y230 463 aaKnown RBP16■□□□□ 0.15
SCLT1-208ENST00000506368 ACOT9Q9Y305 439 aa16■□□□□ 0.15
SCLT1-208ENST00000506368 ACOX3O15254 700 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 DLX3O60479 287 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 STAU1O95793 577 aaKnown RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 ATP6V1B2P21281 511 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 MATN1P21941 496 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 SLC7A2P52569 658 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 GABARAPL2P60520 117 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 STX1BP61266 288 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 NME3Q13232 169 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 KCNJ8Q15842 424 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 NEDD8Q15843 81 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 CYBRD1Q53TN4 286 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 LDLRAD1Q5T700 205 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 GTF2IRD2BQ6EKJ0 949 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 ZBTB33Q86T24 672 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 GTF2IRD2Q86UP8 949 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 FSTL5Q8N475 847 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-208ENST00000506368 P2RY11Q96G91 374 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 MARK4Q96L34 752 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 RDH12Q96NR8 316 aa15.99■□□□□ 0.15
SCLT1-208ENST00000506368 TWNKQ96RR1 684 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms