RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ZNF578Q96N58 590 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 TUBGCP5Q96RT8 1024 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 SYT11Q9BT88 431 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PDFQ9HBH1 243 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 GPATCH2LQ9NWQ4 482 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 TAS2R14Q9NYV8 317 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PCDHB1Q9Y5F3 818 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 TSPAN11A1L157 253 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 TMEM191CA6NGB0 347 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 LMO7DNF2Z398 122 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 TEX33O43247 280 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 LZTS3O60299 673 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 PALMO75781 387 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 MPOP05164 745 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 GZMAP12544 262 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 SERPINA4P29622 427 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 LSSP48449 732 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 ZNF135P52742 658 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 C1orf61Q13536 156 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 RFTN1Q14699 578 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 IRF4Q15306 451 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 ESRP1Q6NXG1 681 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 GUSBP11Q6P575 273 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 PSTKQ8IV42 348 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 RBFAQ8N0V3 343 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 FSTL5Q8N475 847 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 ZNF248Q8NDW4 579 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 ATL2Q8NHH9 583 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 WDR48Q8TAF3 677 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 FNIP1Q8TF40 1166 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 NAT6Q93015 286 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 CRELD1Q96HD1 420 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 CELF6Q96J87 481 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 UBL7Q96S82 380 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 BOCQ9BWV1 1114 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 SLC39A8Q9C0K1 460 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 PRORYQ9H606 182 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 HAUS4Q9H6D7 363 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 ATP13A3Q9H7F0 1226 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 POLR1BQ9H9Y6 1135 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 PCDH12Q9NPG4 1184 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 PCSK1NQ9UHG2 260 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 DOLKQ9UPQ8 538 aa12.17□□□□□ -0.46
PDLIM7-214ENST00000505746 CFAP69A5D8W1 941 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 YY2O15391 372 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 PRPSAP2O60256 369 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 GCATO75600 419 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 TCEA3O75764 348 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 FTLP02792 175 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ALPIP09923 528 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 C6P13671 934 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 CTSEP14091 401 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ERCC2P18074 760 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 TGM2P21980 687 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 HCAR3P49019 387 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 LIG3P49916 1009 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 PCBP4P57723 403 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ERVPABLB-1P60509 514 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 POLR2LP62875 67 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 GABREP78334 506 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 NSUN2Q08J23 767 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 AGERQ15109 404 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ELOCQ15369 112 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 CA9Q16790 459 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ISXQ2M1V0 245 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 WSCD2Q2TBF2 565 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ANO6Q4KMQ2 910 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 RFX8Q6ZV50 586 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 SRLQ86TD4 932 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 CAMK1DQ8IU85 385 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 SDR16C5Q8N3Y7 309 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 PAF1Q8N7H5 531 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 LGMNQ99538 433 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 SNRNP25Q9BV90 132 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 CINPQ9BW66 212 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 TCEAL2Q9H3H9 227 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 SP110Q9HB58 689 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 MRPL47Q9HD33 250 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 COQ6Q9Y2Z9 468 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 SCINQ9Y6U3 715 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 ANKRD11Q6UB99 2663 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 LAMA5O15230 3695 aa12.16□□□□□ -0.46
PDLIM7-214ENST00000505746 A0A1W2PQC6 194 aa12.15□□□□□ -0.46
PDLIM7-214ENST00000505746 DFFAO00273 331 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms