RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 PCDHA10Q9Y5I2 948 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 PRORSD1PA6NEY8 169 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 AP3B1O00203 1094 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 AURKAO14965 403 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 APRTP07741 180 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 PSMA2P25787 234 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 SERPINB1P30740 379 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 CAPGP40121 348 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 AP3M2P53677 418 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 DLG2Q15700 870 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
LETM1-203ENST00000505551 SUPT20HL1Q3ZLR7 823 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 MTERF2Q49AM1 385 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 PPM1JQ5JR12 505 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 SLC39A4Q6P5W5 647 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 USP51Q70EK9 711 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 PIWIL3Q7Z3Z3 882 aaKnown RBP13.39□□□□□ -0.27
LETM1-203ENST00000505551 SLC22A16Q86VW1 577 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 PCDH20Q8N6Y1 951 aaKnown RBP13.39□□□□□ -0.27
LETM1-203ENST00000505551 GALNT6Q8NCL4 622 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 AGR3Q8TD06 166 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 FKBP10Q96AY3 582 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 NRBF2Q96F24 287 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 LHPPQ9H008 270 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 ILKAPQ9H0C8 392 aaPredicted RBP13.39□□□□□ -0.27
LETM1-203ENST00000505551 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 NEK6Q9HC98 313 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 CYP26B1Q9NR63 512 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 PKD2L2Q9NZM6 624 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 SLC17A6Q9P2U8 582 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 TBX20Q9UMR3 447 aa13.39□□□□□ -0.27
LETM1-203ENST00000505551 COPG1Q9Y678 874 aaKnown RBP13.39□□□□□ -0.27
LETM1-203ENST00000505551 G3V2L1 256 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 GRID2O43424 1007 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 H2AFYO75367 372 aaKnown RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 ALX3O95076 343 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 LSM8O95777 96 aaKnown RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 CRYZL1O95825 349 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 YAP1P46937 504 aaKnown RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 TAF1CQ15572 869 aaPredicted RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 ZACNQ401N2 412 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 SPRED1Q7Z699 444 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 ARMC8Q8IUR7 673 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
LETM1-203ENST00000505551 FAM110BQ8TC76 370 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 ZFP90Q8TF47 636 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 IPCEF1Q8WWN9 437 aaPredicted RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 ZNF606Q8WXB4 792 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 BTN2A3PQ96KV6 586 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 C9orf16Q9BUW7 83 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 APOBEC3GQ9HC16 384 aaKnown RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 ZNF358Q9NW07 568 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 RAP2CQ9Y3L5 183 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 LRRIQ4A6NIV6 560 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 PIK3R2O00459 728 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 ACOX3O15254 700 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 PHGDHO43175 533 aaKnown RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 BCAS1O75363 584 aaPredicted RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 DDHD2O94830 711 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 RALGDSQ12967 914 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 NEK5Q6P3R8 708 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 SULF1Q8IWU6 871 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 CANT1Q8WVQ1 401 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 APBA2Q99767 749 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 SP140LQ9H930 580 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 JPH1Q9HDC5 661 aaPredicted RBP13.38□□□□□ -0.27
LETM1-203ENST00000505551 C8orf4Q9NR00 106 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 AGPAT4Q9NRZ5 378 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 MTMR10Q9NXD2 777 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 SATB2Q9UPW6 733 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 TESMINQ9Y4I5 508 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 DGKBQ9Y6T7 804 aa13.38□□□□□ -0.27
LETM1-203ENST00000505551 H7C0C1 242 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 DYRK3O43781 588 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 RASAL1O95294 804 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 PGK2P07205 417 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 EPHX2P34913 555 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 NPTX2P47972 431 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 ATP5OP48047 213 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
LETM1-203ENST00000505551 PHC1P78364 1004 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 CLDN10P78369 228 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 CLCQ05315 142 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 PDK2Q15119 407 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 CARTPTQ16568 116 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 SLC16A12Q6ZSM3 486 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 UNC5BQ8IZJ1 945 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 KCTD6Q8NC69 237 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 OR2T34Q8NGX1 318 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
LETM1-203ENST00000505551 SLC7A14Q8TBB6 771 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms