RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 A6NL46 340 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 K7EPI3 171 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TFECO14948 347 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PRPSAP2O60256 369 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NDUFS2O75306 463 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GCATO75600 419 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NR3C2P08235 984 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GSTM1P09488 218 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 XRCC1P18887 633 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 AKAP5P24588 427 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ALDH3B1P43353 468 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 P2RX3P56373 397 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 MRPS22P82650 360 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 RPL13AP3Q6NVV1 102 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CACUL1Q86Y37 369 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 OR4D10Q8NGI6 311 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NUDT9Q9BW91 350 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 IL1RL2Q9HB29 575 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PCDH9Q9HC56 1237 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NT5MQ9NPB1 228 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PTTG3PQ9NZH4 202 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 HSPB11Q9Y547 144 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 RALGAPBQ86X10 1494 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM2Q9UHN6 1383 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ADGRA3Q8IWK6 1321 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 A0A088AWK7 358 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TEX13CA0A0J9YWL9 993 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NPIPA2E9PIF3 369 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 MED24O75448 989 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 APBB3O95704 486 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 POP4O95707 220 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 UQCRBP14927 111 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF10P21506 573 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 SAT1P21673 171 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TMPOP42166 694 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CRATP43155 626 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 SERINC3Q13530 473 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PTK6Q13882 451 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 DGKDQ16760 1214 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 HACD4Q5VWC8 232 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 RAP1GAP2Q684P5 730 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 COMMD7Q86VX2 200 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CIR1Q86X95 450 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ERI1Q8IV48 349 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ARMC10Q8N2F6 343 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 RCBTB1Q8NDN9 531 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ADCY4Q8NFM4 1077 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 OR10Z1Q8NGY1 313 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CAMKK2Q96RR4 588 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PCYT2Q99447 389 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PRMT1Q99873 361 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 OGDHLQ9ULD0 1010 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PRELID3BQ9Y3B1 194 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TRPM2O94759 1503 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TSPOAP1O95153 1857 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CCDC188H7C350 402 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ARVCFO00192 962 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF23P17027 643 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CCND2P30279 289 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 HTR7P34969 479 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PLOD1Q02809 727 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GRM3Q14832 879 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TRAM2Q15035 370 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TOR1AIP1Q5JTV8 583 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GTF2IRD2BQ6EKJ0 949 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 LRIG3Q6UXM1 1119 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ARMCX2Q7L311 632 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GTF2IRD2Q86UP8 949 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 FJX1Q86VR8 437 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 DHFR2Q86XF0 187 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 CADM2Q8N3J6 435 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 PNMA1Q8ND90 353 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GSTCDQ8NEC7 633 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 LINS1Q8NG48 757 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NKX2-3Q8TAU0 364 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 FAM122AQ96E09 287 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 OTUB1Q96FW1 271 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 IFT27Q9BW83 186 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 GLS2Q9UI32 602 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ACSL5Q9ULC5 683 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 LAMC1P11047 1609 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 DIP2BQ9P265 1576 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF263O14978 683 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NDUFS3O75489 264 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 LGI1O95970 557 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TMIGD3P0DMS9 266 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 NUDT1P36639 197 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 SLC1A2P43004 574 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 POU3F4P49335 361 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ALDH7A1P49419 539 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 ADKP55263 362 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 DSC1Q08554 894 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 SLC9A3R2Q15599 337 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 FAM160B1Q5W0V3 765 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 SLFN13Q68D06 897 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 RBM23Q86U06 439 aaKnown RBP6.29□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM104Q8NE00 496 aa6.29□□□□□ -1.4
CLCN3-204ENST00000504131 RDM1Q8NG50 284 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms