RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PIMREGQ9BSJ6 248 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 KLK15Q9H2R5 256 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 NDST4Q9H3R1 872 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 RABEP2Q9H5N1 569 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 RANGRFQ9HD47 186 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 WDR6Q9NNW5 1121 aaKnown RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 MARCH4Q9P2E8 410 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 TLK1Q9UKI8 766 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 PACSIN3Q9UKS6 424 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 NESP48681 1621 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 MROH2BQ7Z745 1585 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 TYW5A2RUC4 315 aaKnown RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 OR2A25A4D2G3 310 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 FOXO6A8MYZ6 492 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 KLRF2D3W0D1 207 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 HCRTR2O43614 444 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 HS6ST1O60243 411 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 NKX2-2O95096 273 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 WNT1P04628 370 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 IL7RP16871 459 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 CTPS1P17812 591 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 ITGAXP20702 1163 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 TBXAS1P24557 533 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 SLC16A2P36021 539 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 CAMPP49913 170 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 PMS2P54278 862 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 GALCP54803 685 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 TUBA4AP68366 448 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 IKQ13123 557 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 PKP1Q13835 747 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 Q6ZPA2 131 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZNF627Q7L945 461 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 VSIG1Q86XK7 387 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 DNAAF5Q86Y56 855 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 GPR150Q8NGU9 434 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZC3HAV1LQ96H79 300 aaKnown RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 APOL6Q9BWW8 343 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 OGFRQ9NZT2 677 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 CPSF2Q9P2I0 782 aaKnown RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 SEC63Q9UGP8 760 aaKnown RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 LAMP3Q9UQV4 416 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 LSM4Q9Y4Z0 139 aaKnown RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 CUX2O14529 1486 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 ERCC6Q03468 1493 aa5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 BAZ1BQ9UIG0 1483 aaKnown RBP5.5□□□□□ -1.53
HMGB1P3-201ENST00000502802 FAM170AA1A519 330 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 C17orf102A2RUQ5 167 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 GLOD5A6NK44 160 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 C2CD4BA6NLJ0 364 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 HSPB2A8KAH6 182 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 RHODO00212 210 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 TUBBP07437 444 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZNF182P17025 639 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 BMP5P22003 454 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 EPHB2P29323 1055 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 PIK3CAP42336 1068 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 UBXN2AP68543 259 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 HSPB2Q16082 182 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 KYNUQ16719 465 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 TTC39AQ5SRH9 613 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 ISM2Q6H9L7 571 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 LRRC8EQ6NSJ5 796 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 SERPINA11Q86U17 422 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 FAM185AQ8N0U4 392 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 SYT2Q8N9I0 419 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 IL17RCQ8NAC3 791 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 CMASQ8NFW8 434 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 RNF183Q96D59 192 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 GCNAQ96QF7 691 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 ABHD1Q96SE0 405 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 PRRX2Q99811 253 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 MXRA8Q9BRK3 442 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZNF747Q9BV97 191 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 KLHL4Q9C0H6 718 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 ALDH8A1Q9H2A2 487 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 LTB4R2Q9NPC1 389 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 TAB2Q9NYJ8 693 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 UTS2RQ9UKP6 389 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 PTRH2Q9Y3E5 179 aaKnown RBP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 KIF21AQ7Z4S6 1674 aa5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 POLR2AP24928 1970 aaKnown RBP5.49□□□□□ -1.53
HMGB1P3-201ENST00000502802 HSPA4LO95757 839 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 GCP02774 474 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 SRPRAP08240 638 aaKnown RBP5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 UNGP13051 313 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 SRD5A1P18405 259 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 EEF1DP29692 281 aaKnown RBP5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 CLCN5P51795 746 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZBED6P86452 979 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 NAB2Q15742 525 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 ADIPOQQ15848 244 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 KRT24Q2M2I5 525 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 TCTN1Q2MV58 587 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 FBLN7Q53RD9 439 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 C1orf141Q5JVX7 400 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 PMS2CLQ68D20 193 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 LCTLQ6UWM7 567 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 DDIASQ8IXT1 998 aa5.48□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZDHHC23Q8IYP9 409 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms