RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RFPL1O75677 317 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ZMPSTE24O75844 475 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PAPSS2O95340 614 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 IGSF6O95976 241 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PRKCGP05129 697 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 F7P08709 466 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TCF3P15923 654 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CR2P20023 1033 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 DRD4P21917 467 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC1A2P43004 574 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ABCG1P45844 678 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 NRIP1P48552 1158 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 SCNN1BP51168 640 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 AP1S1P61966 158 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PRAMEP78395 509 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 MPP1Q00013 466 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PDE1BQ01064 536 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 NSUN2Q08J23 767 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 DNAJC3Q13217 504 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 LAMB3Q13751 1172 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CYTH1Q15438 398 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PDK4Q16654 411 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 DUSP6Q16828 381 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PLEKHG6Q3KR16 790 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TAF1BQ53T94 588 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 MPP7Q5T2T1 576 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TSTD2Q5T7W7 516 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TEDDM1Q5T9Z0 273 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 FYB2Q5VWT5 728 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 RNF43Q68DV7 783 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 RETSATQ6NUM9 610 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ESRP1Q6NXG1 681 aaKnown RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 NLRP9Q7RTR0 991 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 GLT6D1Q7Z4J2 308 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CPLX4Q7Z7G2 160 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 METTL3Q86U44 580 aaKnown RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CNTN4Q8IWV2 1026 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 LRRC34Q8IZ02 419 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CACNA2D3Q8IZS8 1091 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 DCLK2Q8N568 766 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ZNF557Q8N988 423 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 RIN3Q8TB24 985 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CALML6Q8TD86 181 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ZNF707Q96C28 371 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 ZNF317Q96PQ6 595 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TRIB3Q96RU7 358 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CCT8L2Q96SF2 557 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 AGAP2Q99490 1192 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 FEM1AQ9BSK4 669 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 PBX4Q9BYU1 374 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TM6SF2Q9BZW4 377 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 RHOJQ9H4E5 214 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TLE6Q9H808 572 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 NOD2Q9HC29 1040 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 SNX15Q9NRS6 342 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TDP1Q9NUW8 608 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 FGFR1OP2Q9NVK5 253 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 DZANK1Q9NVP4 752 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 KIAA1522Q9P206 1035 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC2A6Q9UGQ3 507 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 GGT7Q9UJ14 662 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 MSRAQ9UJ68 235 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC25A13Q9UJS0 675 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 MRPS23Q9Y3D9 190 aaKnown RBP8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 CHD7Q9P2D1 2997 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 TRANK1O15050 2925 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CCDC195A0A1B0GUA6 201 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 LOC285095A0A1B0GVY8 99 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 HMX2A2RU54 273 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 VAPBO95292 243 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ALDOAP04075 364 aaKnown RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 PIRTP0C851 137 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 NEFHP12036 1026 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CES1P23141 567 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ARNTP27540 789 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CD70P32970 193 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 MAGEA12P43365 314 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CD151P48509 253 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 TRAF2Q12933 501 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC12A1Q13621 1099 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 IHHQ14623 411 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CNGA3Q16281 694 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 QPCTQ16769 361 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 FUT11Q495W5 492 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 INO80DQ53TQ3 878 aaPredicted RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 PITRM1Q5JRX3 1037 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 RALGPS1Q5JS13 557 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 ATXN7L2Q5T6C5 722 aaPredicted RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 GKAP1Q5VSY0 366 aaPredicted RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 C22orf39Q6P5X5 142 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 TIFABQ6ZNK6 161 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 FAM47EQ6ZV65 393 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 GET4Q7L5D6 327 aaPredicted RBP8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 CMC1Q7Z7K0 106 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 APCDD1Q8J025 514 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 NDUFAF2Q8N183 169 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 PAF1Q8N7H5 531 aa8.13□□□□□ -1.11
PDZRN3-212ENST00000498048 EFHBQ8N7U6 833 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms