RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SCUBE2Q9NQ36 999 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 BFARQ9NZS9 450 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 CHMP2BQ9UQN3 213 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 FCF1Q9Y324 198 aaKnown RBP14.33□□□□□ -0.12
VPS26A-209ENST00000497564 A0A087WUV0 522 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 MAN2B1O00754 1011 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 ATP9BO43861 1147 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 USP12O75317 370 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 ACSL3O95573 720 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 IGSF6O95976 241 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 GSRP00390 522 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 CPP00450 1065 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 AGTP01019 485 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 HLA-DPA1P20036 260 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 MGAT1P26572 445 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 GJA4P35212 333 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 PHBP35232 272 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 CTSOP43234 321 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 GPX6P59796 221 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 OLIG2Q13516 323 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 GAS6Q14393 721 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 EIF4HQ15056 248 aaKnown RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 PON2Q15165 354 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 ITPRIPL2Q3MIP1 535 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 UBAP2Q5T6F2 1119 aaKnown RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 C22orf39Q6P5X5 142 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 SRLQ86TD4 932 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 C1orf210Q8IVY1 113 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 PALM2Q8IXS6 379 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 PCDH20Q8N6Y1 951 aaKnown RBP14.32□□□□□ -0.12
VPS26A-209ENST00000497564 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 KDM1BQ8NB78 822 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 STAMBPL1Q96FJ0 436 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 ERVW-1Q9UQF0 538 aa14.32□□□□□ -0.12
VPS26A-209ENST00000497564 EP300Q09472 2414 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 MAGEB16A2A368 324 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 K7ERQ8 282 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 AGPSO00116 658 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 TRIM24O15164 1050 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 TIMM44O43615 452 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 GJB3O75712 270 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 TCEA3O75764 348 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 FGF1P05230 155 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 ATP5BP06576 529 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 ATXN1LP0C7T5 689 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 CHRNB1P11230 501 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 PGAM1P18669 254 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 OPRD1P41143 372 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 STK19P49842 368 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 SCNN1BP51168 640 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 CDK18Q07002 472 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 MTAPQ13126 283 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 FRG1Q14331 258 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 STAT4Q14765 748 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 SLC1A5Q15758 541 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 PREPLQ4J6C6 727 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 HP1BP3Q5SSJ5 553 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 Q6ZS52 159 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 CYS1Q717R9 158 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 CROCCP2Q86T23 111 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 MPP5Q8N3R9 675 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 EXOC2Q96KP1 924 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 MRGPRX3Q96LB0 322 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 NSMCE3Q96MG7 304 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 RANBP9Q96S59 729 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 RUFY1Q96T51 708 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 NELL2Q99435 816 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 SH3GL2Q99962 352 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 TDRD1Q9BXT4 1180 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 C8orf33Q9H7E9 229 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 LMAN1LQ9HAT1 526 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 MRM3Q9HC36 420 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 FBRSL1Q9HCM7 1045 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 SPATA6Q9NWH7 488 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 C2orf42Q9NWW7 574 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 SYBUQ9NX95 663 aa14.31□□□□□ -0.12
VPS26A-209ENST00000497564 ZC3H7BQ9UGR2 993 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 MRPS17Q9Y2R5 130 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-209ENST00000497564 ATG2BQ96BY7 2078 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 ZNF292O60281 2723 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 GVINP1Q7Z2Y8 2422 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 FAM237BA0A1B0GVD1 139 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-209ENST00000497564 SOCS5O75159 536 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 NDST3O95803 873 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 DLDP09622 509 aaKnown RBP14.3□□□□□ -0.12
VPS26A-209ENST00000497564 CA4P22748 312 aa14.3□□□□□ -0.12
VPS26A-209ENST00000497564 SSTR1P30872 391 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms