RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ATXN1LP0C7T5 689 aaKnown RBP18.42■□□□□ 0.54
RGP1-202ENST00000496906 GAS6Q14393 721 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 ARMC12Q5T9G4 340 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 DENND5AQ6IQ26 1287 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 WDR93Q6P2C0 686 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 DSG4Q86SJ6 1040 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 LINC00523Q86TU6 105 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 OR2T3Q8NH03 318 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 PDCD6IPQ8WUM4 868 aaKnown RBP18.42■□□□□ 0.54
RGP1-202ENST00000496906 SPOCK2Q92563 424 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 CLDN23Q96B33 292 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 SERPINB12Q96P63 405 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 RSPH9Q9H1X1 276 aaPredicted RBP18.42■□□□□ 0.54
RGP1-202ENST00000496906 FBRSQ9HAH7 460 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 SARDHQ9UL12 918 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 PCDHB9Q9Y5E1 797 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 MUC3AQ02505 3323 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 BDP1A6H8Y1 2624 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 STK25O00506 426 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 NDST3O95803 873 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 CHRNA4P43681 627 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 COPAP53621 1224 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 VSNL1P62760 191 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 SARNPP82979 210 aaKnown RBP18.42■□□□□ 0.54
RGP1-202ENST00000496906 HLTFQ14527 1009 aaKnown RBP eCLIP18.42■□□□□ 0.54
RGP1-202ENST00000496906 SLC1A5Q15758 541 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 TMEM92Q6UXU6 159 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 CAND1Q86VP6 1230 aaKnown RBP18.42■□□□□ 0.54
RGP1-202ENST00000496906 ZSWIM9Q86XI8 627 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 EIF1ADQ8N9N8 165 aaKnown RBP18.42■□□□□ 0.54
RGP1-202ENST00000496906 OR52K1Q8NGK4 314 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 PIP4K2CQ8TBX8 421 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 KLHL32Q96NJ5 620 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 ARNT2Q9HBZ2 717 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 CASS4Q9NQ75 786 aa18.42■□□□□ 0.54
RGP1-202ENST00000496906 TSPAN11A1L157 253 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 HLA-DPA1P20036 260 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 MAGEA3P43357 314 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 TNNT3P45378 269 aaPredicted RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 GALNT3Q14435 633 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 CRY1Q16526 586 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 ZNF805Q5CZA5 627 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 SIRPB2Q5JXA9 342 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 LRRC8BQ6P9F7 803 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 PPP1R21Q6ZMI0 780 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 TRIM67Q6ZTA4 783 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 MMAAQ8IVH4 418 aaKnown RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 ZCCHC9Q8N567 271 aaKnown RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 LPCAT1Q8NF37 534 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 PARD6BQ9BYG5 372 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 FRMD8Q9BZ67 464 aaPredicted RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 MKRN2Q9H000 416 aaKnown RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 CHRDQ9H2X0 955 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 XAB2Q9HCS7 855 aaKnown RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 POLR3BQ9NW08 1133 aaPredicted RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 PIH1D1Q9NWS0 290 aaKnown RBP18.41■□□□□ 0.54
RGP1-202ENST00000496906 DKK3Q9UBP4 350 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 NFU1Q9UMS0 254 aa18.41■□□□□ 0.54
RGP1-202ENST00000496906 ANKRD36A6QL64 1941 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 A0A0C4DFX4 3053 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 A0A1W2PQ67 120 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 C1QTNF3-AMACRE9PGA6 284 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 RNASEH1O60930 286 aaKnown RBP18.4■□□□□ 0.54
RGP1-202ENST00000496906 PDGFBP01127 241 aaPredicted RBP18.4■□□□□ 0.54
RGP1-202ENST00000496906 IL1BP01584 269 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 FGF1P05230 155 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 MYBL2P10244 700 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 C7P10643 843 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 MLNP12872 115 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 RPS9P46781 194 aaKnown RBP18.4■□□□□ 0.54
RGP1-202ENST00000496906 METAP1P53582 386 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 RPL26P61254 145 aaKnown RBP18.4■□□□□ 0.54
RGP1-202ENST00000496906 SATB1Q01826 763 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 CDH17Q12864 832 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 CWF19L1Q69YN2 538 aaKnown RBP18.4■□□□□ 0.54
RGP1-202ENST00000496906 BRAT1Q6PJG6 821 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 SYT13Q7L8C5 426 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 SLC25A41Q8N5S1 370 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 FLCNQ8NFG4 579 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 HCAR2Q8TDS4 363 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 PIH1D2Q8WWB5 315 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 PWWP2AQ96N64 755 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 ADGRE3Q9BY15 652 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 MFSD1Q9H3U5 465 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 RAB21Q9UL25 225 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 RPL26L1Q9UNX3 145 aaKnown RBP18.4■□□□□ 0.54
RGP1-202ENST00000496906 SIT1Q9Y3P8 196 aa18.4■□□□□ 0.54
RGP1-202ENST00000496906 KPNA3O00505 521 aaPredicted RBP18.39■□□□□ 0.53
RGP1-202ENST00000496906 ATG13O75143 517 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 PPFIA2O75334 1257 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 CPP00450 1065 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 ITGB7P26010 798 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 GRIA4P48058 902 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 PSMD8P48556 350 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 MTM1Q13496 603 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 CST6Q15828 149 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 HIF1AQ16665 826 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 QPCTQ16769 361 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 POM121L1PQ3SYA9 428 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 FNBP1LQ5T0N5 605 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms