RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 CCDC157Q569K6 752 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 ZNF542PQ5EBM4 170 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 PTAR1Q7Z6K3 402 aaPredicted RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 SRLQ86TD4 932 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 CAMK1DQ8IU85 385 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 LZTR1Q8N653 840 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 FAM181AQ8N9Y4 354 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 TP53I13Q8NBR0 393 aaPredicted RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 MDM1Q8TC05 714 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 FAM71BQ8TC56 605 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 ECHDC3Q96DC8 303 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 TUBGCP5Q96RT8 1024 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 MBNL1Q9NR56 388 aaKnown RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 LUC7L2Q9Y383 392 aaKnown RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 CSNK1G3Q9Y6M4 447 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 U3KQA8 63 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 TDRD6O60522 2096 aaKnown RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 GOLGA6L19H0YKK7 550 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 TRAFD1O14545 582 aaPredicted RBP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 SCAMP1O15126 338 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 DAPK3O43293 454 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 PALMO75781 387 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 TM7SF2O76062 418 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 PTMSP20962 102 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 CASP14P31944 242 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 ARSEP51690 589 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 HNRNPKP61978 463 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 ALKBH5Q6P6C2 394 aaKnown RBP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 TEKT4Q8WW24 435 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 CSPG4P5Q96PW8 444 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 PSKH2Q96QS6 385 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 XPO4Q9C0E2 1151 aaKnown RBP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 CCDC86Q9H6F5 360 aaKnown RBP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 PCDH18Q9HCL0 1135 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 PCDH12Q9NPG4 1184 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 DNAJC28Q9NX36 388 aa12.49□□□□□ -0.41
CLDN12-213ENST00000496677 IPO11Q9UI26 975 aaKnown RBP12.49□□□□□ -0.41
CLDN12-213ENST00000496677 ITPR1Q14643 2758 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 H3BRJ5 948 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 K7ESM1 405 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 DFFAO00273 331 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 TOR1BO14657 336 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 CKMT1AP12532 417 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 CR2P20023 1033 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 MMP12P39900 470 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 YPEL5P62699 121 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 INSM1Q01101 510 aaPredicted RBP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 SLC10A7Q0GE19 358 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 TARDBPQ13148 414 aaKnown RBP eCLIP12.48□□□□□ -0.413e-6■■■■□ 23.6
CLDN12-213ENST00000496677 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 ASTE1Q2TB18 679 aaPredicted RBP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 WSCD2Q2TBF2 565 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 PARGQ86W56 976 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 CPNE8Q86YQ8 564 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 ZNF548Q8NEK5 533 aaPredicted RBP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 CXorf40AQ8TE69 158 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 ZNF599Q96NL3 588 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 WRAP53Q9BUR4 548 aaKnown RBP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 NUP85Q9BW27 656 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 ZWILCHQ9H900 591 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLDN12-213ENST00000496677 NLGN3Q9NZ94 848 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 ACACAQ13085 2346 aa12.48□□□□□ -0.41
CLDN12-213ENST00000496677 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 NEMP2A6NFY4 417 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 FFAR2O15552 330 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 MAFKO60675 156 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 NEBLO76041 1014 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 MYF5P13349 255 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 JUPP14923 745 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 GM2AP17900 193 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
CLDN12-213ENST00000496677 LIG3P49916 1009 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 CYP4F3Q08477 520 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 ELP6Q0PNE2 266 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 RALGDSQ12967 914 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 LBRQ14739 615 aaKnown RBP12.47□□□□□ -0.41
CLDN12-213ENST00000496677 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 SKOR2Q2VWA4 1001 aaPredicted RBP12.47□□□□□ -0.41
CLDN12-213ENST00000496677 CCDC122Q5T0U0 273 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 HES3Q5TGS1 186 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
CLDN12-213ENST00000496677 PGBD5Q8N414 524 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 HSPH1Q92598 858 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 APOLD1Q96LR9 279 aa12.47□□□□□ -0.41
CLDN12-213ENST00000496677 TBATAQ96M53 351 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms