RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 SMARCE1Q969G3 411 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 INTS12Q96CB8 462 aaKnown RBP2.94□□□□□ -1.94
NCK1-212ENST00000496489 PABPC5Q96DU9 382 aaKnown RBP2.94□□□□□ -1.94
NCK1-212ENST00000496489 GFM1Q96RP9 751 aaKnown RBP2.94□□□□□ -1.94
NCK1-212ENST00000496489 BARD1Q99728 777 aaKnown RBP2.94□□□□□ -1.94
NCK1-212ENST00000496489 MXRA8Q9BRK3 442 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 CHCHD6Q9BRQ6 235 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 H2AFJQ9BTM1 129 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 GLIS2Q9BZE0 524 aaPredicted RBP2.94□□□□□ -1.94
NCK1-212ENST00000496489 ISCUQ9H1K1 167 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 CDT1Q9H211 546 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 CATSPERBQ9H7T0 1116 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 DIAPH3Q9NSV4 1193 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 BLOC1S4Q9NUP1 217 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 NDRG3Q9UGV2 375 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 SWAP70Q9UH65 585 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 LIMA1Q9UHB6 759 aaKnown RBP2.94□□□□□ -1.94
NCK1-212ENST00000496489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.94□□□□□ -1.94
NCK1-212ENST00000496489 SQORQ9Y6N5 450 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 CAPN7Q9Y6W3 813 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 PIAS3Q9Y6X2 628 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 A3GALT2U3KPV4 340 aa2.94□□□□□ -1.94
NCK1-212ENST00000496489 ZNF521Q96K83 1311 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 A0A0U1RQF3 1178 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 PI4KAP2A4QPH2 592 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 NPIPB11E5RHQ5 1161 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 F5H0A9 414 aaPredicted RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 MS4A18H0YCH9 400 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 LDB2O43679 373 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 LIASO43766 372 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 USO1O60763 962 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 MOSPD3O75425 235 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 RGS11O94810 467 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 CCNDBP1O95273 360 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 SCGB1D1O95968 90 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 TFP02787 698 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 CDK4P11802 303 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 TBXAS1P24557 533 aaPredicted RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 NFKBIAP25963 317 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ARL3P36405 182 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 THPOP40225 353 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ARF3P61204 181 aaPredicted RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 OLR1P78380 273 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ARF1P84077 181 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 ITGADQ13349 1161 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 LAMB3Q13751 1172 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 FRG1Q14331 258 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 LPIN1Q14693 890 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 GSTA3Q16772 222 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ALG11Q2TAA5 492 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 COL28A1Q2UY09 1125 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ZNF284Q2VY69 593 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 SNX30Q5VWJ9 437 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 Q6ZSV7 163 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 PIM3Q86V86 326 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 MB21D2Q8IYB1 491 aaPredicted RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 CCDC105Q8IYK2 499 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 RBFAQ8N0V3 343 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ZCCHC9Q8N567 271 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 PDILTQ8N807 584 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 GPT2Q8TD30 523 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 GTF3C6Q969F1 213 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 OTULINQ96BN8 352 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 PERPQ96FX8 193 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 RBM38Q9H0Z9 239 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 PLEKHA5Q9HAU0 1116 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 SCPEP1Q9HB40 452 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 BPIFA1Q9NP55 256 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 CYSLTR2Q9NS75 346 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 SLC6A13Q9NSD5 602 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 ANKRD10Q9NXR5 420 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 MAP3K20Q9NYL2 800 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 CISD1Q9NZ45 108 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 INTS6Q9UL03 887 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 AAR2Q9Y312 384 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 SRPRBQ9Y5M8 271 aaKnown RBP2.93□□□□□ -1.94
NCK1-212ENST00000496489 INSL5Q9Y5Q6 135 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 PSAT1Q9Y617 370 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 KCNE2Q9Y6J6 123 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 SCINQ9Y6U3 715 aa2.93□□□□□ -1.94
NCK1-212ENST00000496489 KAT6BQ8WYB5 2073 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 TDRD9Q8NDG6 1382 aaKnown RBP2.92□□□□□ -1.94
NCK1-212ENST00000496489 FAM237BA0A1B0GVD1 139 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 RPS10-NUDT3A0A1W2PQS6 291 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 FSD2A1L4K1 749 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 BECN2A8MW95 431 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 B4DGG1 531 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 USP17L23D6RBM5 183 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 I6L893 689 aaPredicted RBP2.92□□□□□ -1.94
NCK1-212ENST00000496489 CHL1O00533 1208 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 AP3D1O14617 1153 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 TNFRSF13BO14836 293 aaPredicted RBP2.92□□□□□ -1.94
NCK1-212ENST00000496489 HNRNPCL1O60812 293 aaKnown RBP2.92□□□□□ -1.94
NCK1-212ENST00000496489 ZBED4O75132 1171 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 RNASEH2AO75792 299 aaKnown RBP2.92□□□□□ -1.94
NCK1-212ENST00000496489 ACADMP11310 421 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 ETFAP13804 333 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 HOXB2P14652 356 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 ARSBP15848 533 aa2.92□□□□□ -1.94
NCK1-212ENST00000496489 ITGAXP20702 1163 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms