RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TNK2Q07912 1038 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 ZNF252P-AS1Q0IIN9 211 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 SPATS1Q496A3 300 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 RSBN1Q5VWQ0 802 aaPredicted RBP9.14□□□□□ -0.95
HPS4-217ENST00000496385 NXNQ6DKJ4 435 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 SLCO6A1Q86UG4 719 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
HPS4-217ENST00000496385 SLC38A6Q8IZM9 456 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 CLYBLQ8N0X4 340 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 NATD1Q8N6N6 113 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 MAPK15Q8TD08 544 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 GIMAP1Q8WWP7 306 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 CPXM1Q96SM3 734 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 ZNF518BQ9C0D4 1074 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 LHPPQ9H008 270 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 SNTG2Q9NY99 539 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 CNTN6Q9UQ52 1028 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 CDYLQ9Y232 598 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 VWA7Q9Y334 891 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 SPEF1Q9Y4P9 236 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
HPS4-217ENST00000496385 DOCK3Q8IZD9 2030 aa9.14□□□□□ -0.95
HPS4-217ENST00000496385 CNTNAP2Q9UHC6 1331 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 TEX51A0A1B0GUA7 166 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FAM86B1E9PN63 330 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 TSPAN1O60635 241 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 LSM8O95777 96 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 ALDOAP04075 364 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 PRKCGP05129 697 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FAM86B2P0C5J1 330 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 TCF4P15884 667 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 GARSP41250 739 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 PLA2G16P53816 162 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ADARB1P78563 741 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 PRKAA1Q13131 559 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 WDR44Q5JSH3 913 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FAM45BPQ6NSW5 357 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 DNAJC24Q6P3W2 148 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 DCUN1D2Q6PH85 259 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 LBX2Q6XYB7 198 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FKBP9P1Q75LS8 142 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CAND1Q86VP6 1230 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 Q8N9G6 341 aaPredicted RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 BPIFB6Q8NFQ5 453 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FAM45AQ8TCE6 357 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ZFP90Q8TF47 636 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CHURC1Q8WUH1 139 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ISL2Q96A47 359 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ERLEC1Q96DZ1 483 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 SPATA17Q96L03 361 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ZNF560Q96MR9 790 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FTHL17Q9BXU8 183 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 MTMR12Q9C0I1 747 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ADAM28Q9UKQ2 775 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 PCDHA1Q9Y5I3 950 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 F8VP50 259 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 STX16-NPEPL1H3BU86 382 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 SHOXO15266 292 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 GPC4O75487 556 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 DAB1O75553 588 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 TIPRLO75663 272 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 UPK1BO75841 260 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CCNKO75909 580 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 TOP3BO95985 862 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 APOA4P06727 396 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CCDC159P0C7I6 412 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 RPL7AP62424 266 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 TOP3AQ13472 1001 aaPredicted RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 NOMO1Q15155 1222 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CYBRD1Q53TN4 286 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 BRDTQ58F21 947 aaPredicted RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 STEAP4Q687X5 459 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ZNF544Q6NX49 715 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 ZCCHC8Q6NZY4 707 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 SV2AQ7L0J3 742 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 DAW1Q8N136 415 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 GPRC5AQ8NFJ5 357 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 SLC7A14Q8TBB6 771 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 CYGBQ8WWM9 190 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 PGBD4Q96DM1 585 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 VPS35Q96QK1 796 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 COQ7Q99807 217 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FUNDC2Q9BWH2 189 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 RSAD1Q9HA92 442 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 SYBUQ9NX95 663 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.13□□□□□ -0.95
HPS4-217ENST00000496385 ZMAT5Q9UDW3 170 aaKnown RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 ZNF214Q9UL59 606 aaPredicted RBP9.13□□□□□ -0.95
HPS4-217ENST00000496385 SLC45A1Q9Y2W3 748 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 MAU2Q9Y6X3 613 aa9.13□□□□□ -0.95
HPS4-217ENST00000496385 E7ENX8 843 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TPP1O14773 563 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 GAS2O43903 313 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 PSMD10O75832 226 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 NAGAP17050 411 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TCN1P20061 433 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 TPSB2P20231 275 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 IL32P24001 234 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms